GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Common variants on 1p36 and 1q42 are associated with cutaneous basal cell carcinoma but not with melanoma or pigmentation traits.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
arhgef10l ARHGEF10L ENSDARG00000074244 7 Not determined 3
LOC555552 RHOU ENSDARG00000005626 None Not determined 5
LOC799435 ARHGEF10L ENSDARG00000088630 7 Not determined 3
rcc2 RCC2 ENSDARG00000011510 1 Not determined 1
rhoua RHOU ENSDARG00000019709 4 Not determined 5
rhoub RHOU ENSDARG00000012968 None Not determined 5
zgc:66317 PADI4 ENSDARG00000044167 2 Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • PADI6
Short-link