GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
clybl CLYBL ENSDARG00000029729 None Not determined 3
D7R492_DANRE OXER1 ENSDARG00000087084 1 Not determined 1
dmrt2a DMRT2 ENSDARG00000015072 2 Not determined 2
dmrt2b DMRT2 ENSDARG00000070013 1 Not determined 2
fhit FHIT ENSDARG00000068850 None Not determined 9
fhit FHIT ENSDARG00000078195 None Not determined 9
foxp1a FOXP1 ENSDARG00000004843 None Not determined 2
foxp1b FOXP1 ENSDARG00000014181 3 Not determined 2
grik1a GRIK1 ENSDARG00000069139 None Not determined 6
has3 HAS3 ENSDARG00000057210 1 Not determined 1
LOC100007471 ZNF544 ENSDARG00000086855 None Not determined 1
LOC100331214 LPL ENSDARG00000034667 None Not determined 21
LOC100333037 IL16 ENSDARG00000039884 2 Not determined 1
LOC561540 GRIK1 ENSDARG00000040627 5 Not determined 6
LOC570448 SLCO3A1 ENSDARG00000068296 None Not determined 4
LOC799182 ZNF423 ENSDARG00000086825 None Not determined 1
lpl LPL ENSDARG00000087697 1 Not determined 21
LPL (1 of 2) LPL ENSDARG00000091659 2 Not determined 21
MEIS2 (2 of 2) MEIS2 ENSDARG00000091279 None Not determined 2
meis2.1 MEIS2 ENSDARG00000077840 1 Not determined 2
meis2.2 MEIS2 ENSDARG00000042361 None Not determined 2
meis3 MEIS2 ENSDARG00000002795 None Not determined 2
naprt1 NAPRT1 ENSDARG00000027930 None Not determined 1
si:ch211-216l23.1 ZNF423 ENSDARG00000059707 2 Not determined 1
si:dkey-112g5.1 OXER1 ENSDARG00000062874 None Not determined 1
si:dkey-92i15.4 IL16 ENSDARG00000078387 4 Not determined 1
slco3a1 SLCO3A1 ENSDARG00000018726 2 Not determined 4
SLCO3A1 (3 of 3) SLCO3A1 ENSDARG00000074173 None Not determined 4
znf423 ZNF423 ENSDARG00000095732 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • EREG
  • FLJ34870
  • LOC390980
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