GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Common SNPs in HMGCR in micronesians and whites associated with LDL-cholesterol levels affect alternative splicing of exon13.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
apoeb APOE ENSDARG00000040295 1 Not determined 42
hmgcra HMGCR ENSDARG00000052734 4 Not determined 9
hmgcrb HMGCR ENSDARG00000059301 None Not determined 9
zgc:110064 APOE ENSDARG00000086370 1 Not determined 42

The following reported genes could not be linked automatically to a zebrafish gene:

  • APOC1
  • APOC2
  • APOC4
Short-link