GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association with select biomarker traits in the Framingham Heart Study.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
clgn CLGN ENSDARG00000009315 1 Not determined 1
drd2a DRD2 ENSDARG00000056926 2 Not determined 2
drd2b DRD2 ENSDARG00000011091 2 Not determined 2
drd2l DRD2 ENSDARG00000014858 1 Not determined 2
elmod2 ELMOD2 ENSDARG00000052370 None Not determined 1
LOC567443 PTPRE ENSDARG00000015891 5 Not determined 2
MKI67 MKI67 ENSDARG00000091150 2 Not determined 1
ptpreb PTPRE ENSDARG00000021151 2 Not determined 2
si:ch211-234p6.10 CRP ENSDARG00000056498 None Not determined 13
si:ch211-234p6.12 CRP ENSDARG00000042613 None Not determined 13
si:ch211-234p6.13 CRP ENSDARG00000056462 None Not determined 13
si:ch211-234p6.14 CRP ENSDARG00000071454 2 Not determined 13
si:ch211-234p6.7 CRP ENSDARG00000071456 None Not determined 13
si:ch211-234p6.8 CRP ENSDARG00000071457 None Not determined 13
si:ch211-234p6.9 CRP ENSDARG00000095730 None Not determined 13
si:ch211-270n8.1 CRP ENSDARG00000045089 None Not determined 13
si:ch211-274f20.2 CLGN ENSDARG00000058579 3 Not determined 1
zgc:101049 CRP ENSDARG00000071051 1 Not determined 13
znf536 ZNF536 ENSDARG00000022251 3 Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • FCER1A
  • IGSF4B
  • IGSF4B
  • OR10J1
  • OR10J3
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