B0V1S6_DANRE

Ensembl ID:
ENSDARG00000092420
Description:
Novel protein similar to vertebrate plexin B family [Source:UniProtKB/TrEMBL;Acc:B0V1S6]
Human Orthologue:
PLXNB3
Human Description:
plexin B3 [Source:HGNC Symbol;Acc:9105]
Mouse Orthologue:
Plxnb3
Mouse Description:
plexin B3 Gene [Source:MGI Symbol;Acc:MGI:2154240]

Alleles

There are 4 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa6093 Essential Splice Site Mutation detected in F1 DNA During 2018
sa34299 Nonsense Mutation detected in F1 DNA During 2018
sa21199 Nonsense Available for shipment Available now
sa13997 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa6093
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
A > C
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000147940 Essential Splice Site None 660 2 9
Genomic Location (Zv9):
Chromosome 8 (position 8740902)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8157484
GRCz11 8 8196069
KASP Assay ID:
554-3725.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TCTTTTCAACCTNCCCCTCTTTCTTTCTTCTTGATCCCTATCTCTYTTTC[A/C]GCAGGTGAGGGGGTGCCATGCCAGCTGCTGCTCCCCTGTTGCTGCTCCTY
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34299
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000147940 Nonsense 197 660 2 9

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 8741508)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8158090
GRCz11 8 8196675
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GGCGGGGCTACACCAGTAAAGGACCTGGTGGGATCCCACCAATCACAATG[C/T]GACGTTTAACCCCAGTTGAGCGACATTCTGCACCGGCGTTCTCCCATGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21199
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000147940 Nonsense 308 660 2 9

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 8741841)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8158423
GRCz11 8 8197008
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TTGGCTTTCACCGGGAGCAACCTGCGCTGTTTGTGGCTATGGCCATGGGA[C/T]AAGCATCAACTCCTACACCCACAGACAAGTCGGCTCTTTGTGTGTACACG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13997
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000147940 Essential Splice Site 471 660 4 9

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 8760486)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 8177068
GRCz11 8 8215653
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TACTGCTGGAYGCCACCAAACAGAACRTCTTCGTATTGACYGAAAGAAAG[G/A]TAYTGGAGACAAACTGCTTCCTTTTATCTGSCRTCAAGTGAAACAAACAG
Associated Phenotype:
Not determined

OMIM

OMIM information for PLXNB3

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