slco1f3

Ensembl ID:
ENSDARG00000076531
ZFIN ID:
ZDB-GENE-080212-5
Description:
solute carrier organic anion transporter family, member 1F3 [Source:RefSeq peptide;Acc:NP_001129156
Human Orthologue:
SLCO1C1
Human Description:
solute carrier organic anion transporter family, member 1C1 [Source:HGNC Symbol;Acc:13819]
Mouse Orthologue:
Slco1c1
Mouse Description:
solute carrier organic anion transporter family, member 1c1 Gene [Source:MGI Symbol;Acc:MGI:1889679]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa24811 Nonsense Available for shipment Available now
sa44438 Nonsense Mutation detected in F1 DNA During 2018

Mutation Details

Allele Name:
sa24811
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113623 Nonsense 191 559 6 13
Genomic Location (Zv9):
Chromosome Zv9_NA995 (position 103702)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 75941666
GRCz11 4 77326196
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
CAAGAGCTCTACCTGAAAATTCCCAAATTTCTGAGCTAAACCACCCCCGG[C/T]AACAGCACAAAACCACCCCCAGCCTTACAGAGATAGTCAAAGGTACGGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44438
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113623 Nonsense 405 559 10 13
Genomic Location (Zv9):
Chromosome Zv9_NA995 (position 104693)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 75940675
GRCz11 4 77325205
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
CAGAGCTGGGGACTGAGCGTTGGCAACTCCTCTGCAGTTCTTGGCCAGTG[T/A]TCAAGAGATCCCAAATGCAACAGAATGTTCTACATTTATCTGGGATTGCA
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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