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e.g. ENSDARG00000093395 or slc2a11b or ENSG00000135862 or LAMC1 or sa457
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zgc:110566
- Ensembl ID:
- ENSDARG00000076106
- ZFIN ID:
- ZDB-GENE-050522-531
- Description:
- hypothetical protein LOC553628 [Source:RefSeq peptide;Acc:NP_001019821]
- Human Orthologue:
- TRIM65
- Human Description:
- tripartite motif-containing 65 [Source:HGNC Symbol;Acc:27316]
- Mouse Orthologue:
- Trim65
- Mouse Description:
- tripartite motif-containing 65 Gene [Source:MGI Symbol;Acc:MGI:2442815]
Alleles
There is 1 allele of this gene:
| Allele name | Consequence | Status | Availability Estimate |
|---|---|---|---|
| sa7264 | Nonsense | Mutation detected in F1 DNA | During 2018 |
Mutation Details
- Allele Name:
- sa7264
- Current Status:
-
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs. - Availability:
- We currently estimate that this allele will be available during 2018.
- Mutation:
- T > A
- Consequence:
- Nonsense
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000043148 | Nonsense | 435 | 438 | 6 | 6 |
- Genomic Location (Zv9):
- Chromosome 3 (position 5102671)
- Other Location(s):
-
Assembly Chromosome Position GRCz10 3 4625772 GRCz11 3 4536062 - KASP Assay ID:
- 554-4476.1 (used for ordering genotyping assays from LGC Genomics)
- KASP Sequence:
- GGGCAAAGGAATCCCAAMCGCTGGGAGCCTGGAGTGTTTAGGAATAAATA[T/A]TGGGACGAGTAAATCCAATCCCTAAACATACTKTAATTGGGCTAATTGTA
- Associated Phenotype:
- Not determined
GWAS
This gene's human homologue has been identified in the following GWAS studies:
- White matter hyperintensity burden: Genome-wide association studies of cerebral white matter lesion burden: the CHARGE consortium. (View Study)
(GWAS data comes from http://www.genome.gov/gwastudies/.)
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