suv420h2

Ensembl ID:
ENSDARG00000075461
ZFIN ID:
ZDB-GENE-080523-2
Description:
suppressor of variegation 4-20 protein-like 2 [Source:RefSeq peptide;Acc:NP_001091656]
Human Orthologue:
SUV420H2
Human Description:
suppressor of variegation 4-20 homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:28405]
Mouse Orthologue:
Suv420h2
Mouse Description:
suppressor of variegation 4-20 homolog 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:2385262]

Alleles

There are 4 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa17369 Nonsense Available for shipment Available now
sa20036 Nonsense Available for shipment Available now
sa33199 Nonsense Available for shipment Available now
sa20035 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa17369
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109104 Nonsense 70 2065 3 9
ENSDART00000113053   None 37 None 2
ENSDART00000121907 Nonsense 70 2065 2 8
ENSDART00000124458 Nonsense 70 519 3 9
Genomic Location (Zv9):
Chromosome 3 (position 31031051)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 30749090
GRCz11 3 30879932
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CCTGCGGTTCAAGCGCACGCATGACTTCCAAGCCAYCTTTGATGCTCTGT[T/A]GGATGGAGAGTGGGTYAGCGACTATTTCGCTGGGCTGGGTTCACACCGRC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20036
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109104 Nonsense 1056 2065 9 9
ENSDART00000113053   None 37 None 2
ENSDART00000121907 Nonsense 1056 2065 8 8
ENSDART00000124458   None 519 None 9
Genomic Location (Zv9):
Chromosome 3 (position 31022594)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 30740633
GRCz11 3 30871475
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TGATCCTAGAAGTGAAACATCCAAAATTAGGAAAAGAGTCAAATACATCT[T/A]GGAAGAGGATAACCAAGTGGAAAATGAGAAAGAAGTTGAAGAAAGAACAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33199
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109104 Nonsense 1486 2065 9 9
ENSDART00000113053   None 37 None 2
ENSDART00000121907 Nonsense 1486 2065 8 8
ENSDART00000124458   None 519 None 9
Genomic Location (Zv9):
Chromosome 3 (position 31021303)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 30739342
GRCz11 3 30870184
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AATACAGGATCCTTCAGTAGCCCTTTCTCCCAAAGTCCTGCTGATGCGTG[G/A]AATCCAGAGACTCCTTACCTTGGATCCCCAAGTCCAGTGAGTAACTTTAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20035
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109104 Nonsense 2063 2065 9 9
ENSDART00000113053   None 37 None 2
ENSDART00000121907 Nonsense 2063 2065 8 8
ENSDART00000124458   None 519 None 9
Genomic Location (Zv9):
Chromosome 3 (position 31019572)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 30737611
GRCz11 3 30868453
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGACTGAGGCTTGTGGTGACTGACGGTACAGTGGATCTGGACCTACAATA[T/A]ACCGATTAATAATGACGTCTTTTATTGATATGCTGACATTTATTTATTTA
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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