abcg2c

Ensembl ID:
ENSDARG00000058574
ZFIN ID:
ZDB-GENE-050517-37
Description:
ATP-binding cassette, sub-family G (WHITE), member 2c [Source:RefSeq peptide;Acc:NP_001034728]
Human Orthologue:
ABCG2
Human Description:
ATP-binding cassette, sub-family G (WHITE), member 2 [Source:HGNC Symbol;Acc:74]
Mouse Orthologues:
Abcg2, Abcg3
Mouse Descriptions:
ATP-binding cassette, sub-family G (WHITE), member 2 Gene [Source:MGI Symbol;Acc:MGI:1347061]
ATP-binding cassette, sub-family G (WHITE), member 3 Gene [Source:MGI Symbol;Acc:MGI:1351624]

Alleles

There are 3 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa7378 Missense Mutation detected in F1 DNA During 2018
sa22207 Nonsense Available for shipment Available now
sa7377 Missense Mutation detected in F1 DNA During 2018

Mutation Details

Allele Name:
sa7378
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Missense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000032322   1 634 2 16
ENSDART00000091806   1 263 2 7
ENSDART00000141790 Missense 15 185 2 5
Genomic Location (Zv9):
Chromosome 13 (position 4738954)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 4933732
GRCz11 13 5062318
KASP Assay ID:
554-4319.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TGAGATTTTATTTTTGTTCATTTCAATCTTCCTTCAGGCAGAGGAAGGCA[T/A]CATGCTGGATGAGGTGGTTGTGAATGAGCAGTCGTCCACAGATGCGGAWG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22207
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000032322   None 634 None 16
ENSDART00000091806 Nonsense 228 263 6 7
ENSDART00000141790   None 185 None 5
Genomic Location (Zv9):
Chromosome 13 (position 4724825)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 4919603
GRCz11 13 5048189
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AACACTGCCAACTCCATCATGGAGCTCCTGCAGAAGTACAAAATCTCATA[T/A]CAAATATACCTGCCTCCCGCTGCAAGCAATAATAAAGTATGCCTTTTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7377
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
C > T
Consequence:
Missense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000032322   None 634 None 16
ENSDART00000091806 Missense 233 263 6 7
ENSDART00000141790   None 185 None 5
Genomic Location (Zv9):
Chromosome 13 (position 4724812)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 4919590
GRCz11 13 5048176
KASP Assay ID:
554-4318.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CCATCATGGAGCTCCTGCAGAAGTACAAAATCTCATATCAAATATWCCTG[C/T]CTCCCGCTGCAAGCAATAATAAAGTATGCCTTTTAAAAACACTTTCTTCC
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

OMIM

More OMIM information for ABCG2

Register

If you would like to be informed when the status of this gene changes (for example, a new allele is generated or an allele is made available for distribution) then please enter your details below:

Short-link