zgc:101053

Ensembl ID:
ENSDARG00000042338
ZFIN ID:
ZDB-GENE-040801-97
Description:
hypothetical protein LOC445184 [Source:RefSeq peptide;Acc:NP_001003578]
Human Orthologue:
LPAR2
Human Description:
lysophosphatidic acid receptor 2 [Source:HGNC Symbol;Acc:3168]
Mouse Orthologue:
Lpar2
Mouse Description:
lysophosphatidic acid receptor 2 Gene [Source:MGI Symbol;Acc:MGI:1858422]

Alleles

There is 1 allele of this gene:

Allele name Consequence Status Availability Estimate
sa259 Nonsense F2 line generated During 2018

Mutation Details

Allele Name:
sa259
Current Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062081 Nonsense 6 356 2 3
Genomic Location (Zv9):
Chromosome 3 (position 53729764)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 52837079
GRCz11 3 53091742
KASP Assay ID:
554-2694.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
GAAGAGGAGGGATTTACAGTGTTTTCTTTAATAATGGTATTTAACAGCTG[T/A]GAGGCTTTTGACAATCCAGTGTCTTACTTCTACAACAGGACTGGCAAGCC
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

  • Sphingolipid levels: Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations. (View Study)

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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