zfr

Ensembl ID:
ENSDARG00000027109
ZFIN ID:
ZDB-GENE-030131-378
Description:
Zinc finger RNA-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q6PCR6]
Human Orthologue:
ZFR
Human Description:
zinc finger RNA binding protein [Source:HGNC Symbol;Acc:17277]
Mouse Orthologue:
Zfr
Mouse Description:
zinc finger RNA binding protein Gene [Source:MGI Symbol;Acc:MGI:1341890]

Alleles

There are 6 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa30863 Nonsense Mutation detected in F1 DNA During 2018
sa40526 Nonsense Mutation detected in F1 DNA During 2018
sa33675 Nonsense Mutation detected in F1 DNA During 2018
sa40525 Essential Splice Site, Nonsense Mutation detected in F1 DNA During 2018
sa15440 Nonsense Available for shipment Available now
sa40524 Essential Splice Site Mutation detected in F1 DNA During 2018

Mutation Details

Allele Name:
sa30863
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362   None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21
ENSDART00000026362   None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42757467)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40538732
GRCz11 5 41138885
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
CAGCCGGCCGCTGGGGTTGCATACACCCACCCCACTACAGTGGCCAGCTA[T/A]ACTGTACATCAAGCACCTGTGGCAGCGCACACAGTGGCAGCAGCCTATGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40526
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362   None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21
ENSDART00000026362   None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42757467)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40538732
GRCz11 5 41138885
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
CAGCCGGCCGCTGGGGTTGCATACACCCACCCCACTACAGTGGCCAGCTA[T/A]ACTGTACATCAAGCACCTGTGGCAGCGCACACAGTGGCAGCAGCCTATGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33675
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362   None 478 None 15
ENSDART00000074789 Nonsense 134 1074 3 20
ENSDART00000129415 Nonsense 134 1057 3 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42757241)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40538506
GRCz11 5 41138659
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GACAGCCAGAAGTACCCCCACCACCACCTCCAGTCACCTCACAAAACTAC[C/T]AGGTAAGAGGAAGGAGCATGCTTGTTGTAATATAGTTTGGGTTGGGCAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40525
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Essential Splice Site, Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362   None 478 None 15
ENSDART00000074789 Nonsense 276 1074 6 20
ENSDART00000129415 Essential Splice Site 276 1057 None 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42755956)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40537221
GRCz11 5 41137374
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TCATACTCGGGCTATGAAGCGGCAGTGTATTCGGCTGCCTCCTCTTACTA[T/A]CAGCAGCAGCAACAGCAGCAAAAACAGGCAGCCGTTGCAGCAGCAGCCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15440
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 Nonsense 331 478 7 15
ENSDART00000074789 Nonsense 669 1074 12 20
ENSDART00000129415 Nonsense 652 1057 13 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42752597)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40533862
GRCz11 5 41134015
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TGCTCAGGCGCTAYGAAGAAGATATGTATTGGCGGCGCATGGAGGAAGAA[C/T]AGCACCACTGGGAGGACAGGCGAAGAATGCCYGATGGAGGGTATCCACAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40524
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 Essential Splice Site None 478 None 15
ENSDART00000074789 Essential Splice Site 1014 1074 None 20
ENSDART00000129415 Essential Splice Site 997 1057 None 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42745643)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40526908
GRCz11 5 41127061
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGCATTCATGGAAGAGCAACAGAGAGAGGACATTACGTCAAGCGCTCAGG[T/A]AAAATAACTTTTGTCAGTCAAATAAAAGACTCTTTATTTCATTCAAGGGT
Associated Phenotype:
Not determined

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