slc38a3

Ensembl ID:
ENSDARG00000014587
ZFIN ID:
ZDB-GENE-040718-395
Description:
solute carrier family 38, member 3 [Source:RefSeq peptide;Acc:NP_001002648]
Human Orthologue:
SLC38A5
Human Description:
solute carrier family 38, member 5 [Source:HGNC Symbol;Acc:18070]
Mouse Orthologue:
Slc38a5
Mouse Description:
solute carrier family 38, member 5 Gene [Source:MGI Symbol;Acc:MGI:2148066]

Alleles

There are 3 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa11448 Essential Splice Site Available for shipment Available now
sa27196 Essential Splice Site Mutation detected in F1 DNA During 2018
sa41194 Essential Splice Site Mutation detected in F1 DNA During 2018

Mutation Details

Allele Name:
sa11448
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025024 Essential Splice Site 43 472 3 16

The following transcripts of ENSDARG00000014587 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 24448255)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 23574073
GRCz11 8 23595312
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
AGTTTTTGCCACACAAGAGTGATGGAGGAAAAACCCCTCAGTTTACAGAC[G/A]TGAGTGCAGAAATTAAGATACAGCTCATAATTTGAGGCTCATATTARGGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27196
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025024 Essential Splice Site 212 472 9 16

The following transcripts of ENSDARG00000014587 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 24442888)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 23568706
GRCz11 8 23589945
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GCTACACCAGTGGCTTCTCTCTGACATGTATGGTATTCTTCTTGATCTCA[G/A]TAAGTGTTATTAAAAGTATTTAATGCTGTGGCTTTTGTGTGGTCTTATAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41194
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025024 Essential Splice Site 438 472 None 16

The following transcripts of ENSDARG00000014587 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 24436344)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 23562162
GRCz11 8 23583401
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TATCGTTTCCCCTGAGCAAGAACCAATGAACTCAAGACCAAAAATTCTGG[T/A]GAGTCTCAAGCTTTTTCTGCTTCCTGCATCGATACATGGTTAAAAACAAT
Associated Phenotype:
Not determined

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