Transcriptome profile for hu3072

Morphological Phenotype:
Control; 5 dpf

Control; 5 dpf

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Mutant; 5 dpf

Mutant; 5 dpf

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Control; 5 dpf

Control; 5 dpf

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Mutant; 5 dpf

Mutant; 5 dpf

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Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
larval locomotory behavior
GO:0008345
disrupted
PATO:0001507
abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037
skeletal muscle
ZFA:0005277
degenerate
PATO:0000639
abnormal
PATO:0000460
Larval:Day 5
ZFS:0000037
swim bladder
ZFA:0000076
aplastic
PATO:0001483
abnormal
PATO:0000460

The table belows shows the transcriptome profile for allele hu3072.

Please see our FAQs for details on the methodology. Also you can hover over each column heading below for more information.

The following regions have been identified as being significantly differentially expressed:

Region 3' end position 3' end strand Adjusted p-value Log2 fold change (mutant/sibling) Closest Ensembl gene 3' end Gene name e74 Ensembl gene ID e74 Ensembl transcript ID Gene description dag1_mut1 normalised count dag1_wt1 normalised count dag1_mut2 normalised count dag1_wt2 normalised count dag1_mut3 normalised count dag1_wt3 normalised count
22:2427701-2427900 2428100 1 1.29 × 10-20 6.5 6186 n/a n/a n/a n/a 187.5 1.6 204.9 2.8 0.0 0.0
22:36075501-36075820 36075820 1 1.29 × 10-20 -4.7 -2578 n/a n/a n/a n/a 2.8 67.0 6.8 191.6 4.2 97.4
22:35362201-35362500 n/a -1 1.02 × 10-06 -3.2 n/a n/a n/a n/a n/a 7.1 65.9 2.7 49.3 9.9 68.4
22:18492101-18492670 18492670 1 1.12 × 10-06 -2.2 -11857 n/a n/a n/a n/a 12.8 119.8 95.6 398.5 45.1 198.7
22:36765401-36765900 n/a -1 1.49 × 10-05 -3.1 n/a n/a n/a n/a n/a 7.8 51.8 4.1 67.4 7.0 48.7
5:1207667-1207800 1207667 -1 1.49 × 10-05 3.6 -4331 n/a n/a n/a n/a 61.8 3.1 51.9 6.6 18.3 1.3
22:36022301-36022900 36023031 1 2.26 × 10-05 -1.5 -50143 n/a n/a n/a n/a 63.9 200.4 82.0 219.2 49.3 130.3
22:36764901-36765200 n/a -1 2.26 × 10-05 -3.7 n/a n/a n/a n/a n/a 1.4 26.2 5.5 44.6 2.8 52.6
22:36076001-36076173 36076173 1 2.26 × 10-05 -1.5 -2225 n/a n/a n/a n/a 69.6 210.4 77.9 259.9 83.1 194.7
12:37046024-37046700 37046024 -1 3.05 × 10-05 1.9 -1 socs3b ENSDARG00000026611 ENSDART00000037904 suppressor of cytokine signaling 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2528] 268.5 113.0 398.9 104.4 573.2 122.4
3:16631101-16631468 16631468 1 8.58 × 10-05 1.8 -853 n/a n/a n/a n/a 480.1 128.7 229.5 105.3 730.9 173.7
20:31297701-31298600 31298611 1 4.99 × 10-04 2.2 -11885 n/a n/a n/a n/a 176.9 61.2 165.3 36.1 204.2 23.7
22:19322601-19322900 n/a -1 9.79 × 10-04 -1.5 n/a n/a n/a n/a n/a 37.6 111.5 34.2 84.4 39.4 123.7
4:9193301-9194417 9194417 1 1.53 × 10-03 1.0 1 flncb ENSDARG00000018820 ENSDART00000134286 filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175] 625.0 329.7 573.8 259.0 763.3 402.6
24:40415211-40415600 40415211 -1 2.35 × 10-03 -1.2 -86707 n/a n/a n/a n/a 117.2 315.6 102.5 241.0 170.4 330.3
3:16726901-16728074 16728074 1 2.96 × 10-03 1.2 648 n/a n/a n/a n/a 381.4 145.5 393.5 165.1 242.2 131.6
22:37932401-37932800 n/a -1 3.28 × 10-03 -2.2 n/a n/a n/a n/a n/a 7.1 37.2 9.6 47.4 9.9 36.8
19:1977101-1977300 1975674 -1 3.96 × 10-03 0.9 4 rplp1 ENSDARG00000021864 ENSDART00000148062 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663] 3486.0 2075.4 3706.4 2094.8 6793.3 3565.8
22:38792701-38793100 n/a 1 4.38 × 10-03 -1.8 n/a n/a n/a n/a n/a 33.4 79.0 31.4 147.1 31.0 100.0
22:18561901-18562200 n/a 1 7.45 × 10-03 -2.1 n/a n/a n/a n/a n/a 4.3 19.4 23.2 84.4 5.6 40.8
22:12279701-12280041 12280041 1 7.45 × 10-03 -1.6 1155 n/a n/a n/a n/a 34.8 80.1 28.7 92.0 28.2 113.2
17:17661701-17662000 n/a 1 9.07 × 10-03 -1.8 n/a n/a n/a n/a n/a 14.2 52.3 12.3 46.5 14.1 44.7
3:26908018-26908900 26908018 -1 9.07 × 10-03 1.5 -2 hsp70l ENSDARG00000021924 ENSDART00000010477 heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1] 216.6 69.1 215.9 69.3 69.0 38.2
15:19050301-19050400 19050253 -1 0.01 2.9 -19986 n/a n/a n/a n/a 32.0 4.7 5.5 1.9 60.6 6.6
22:20197701-20198000 n/a -1 0.01 -2.1 n/a n/a n/a n/a n/a 2.8 17.8 13.7 52.2 9.9 44.7
12:28600843-28601000 28600843 -1 0.01 -1.1 -258 n/a n/a n/a n/a 121.5 269.5 94.3 183.1 57.7 131.6
22:37712701-37713000 n/a -1 0.01 -1.6 n/a n/a n/a n/a n/a 22.0 56.5 30.1 94.9 12.7 50.0
18:20641401-20641700 20641370 -1 0.01 2.9 -998 n/a n/a n/a n/a 17.0 2.6 6.8 0.9 50.7 6.6
22:33030801-33031000 n/a 1 0.02 -2.9 n/a n/a n/a n/a n/a 5.0 23.5 2.7 24.7 2.8 31.6
14:53241701-53241900 53241695 -1 0.02 1.1 -28865 n/a n/a n/a n/a 115.1 41.9 204.9 90.1 311.2 168.4
22:35153301-35153700 35153300 -1 0.02 1.3 -23105 n/a n/a n/a n/a 109.4 46.1 101.1 27.5 129.6 60.5
22:35356495-35356700 35356495 -1 0.02 -2.6 189423 n/a n/a n/a n/a 5.0 31.4 4.1 52.2 11.3 35.5
14:36183701-36183895 36183895 1 0.02 2.7 13375 n/a n/a n/a n/a 376.4 75.9 132.5 59.8 794.2 61.8
12:44240406-44240700 44240406 -1 0.02 2.0 -98342 n/a n/a n/a n/a 25.6 8.9 109.3 25.6 16.9 3.9
1:56289513-56289900 56289513 -1 0.02 2.0 -1391 n/a n/a n/a n/a 565.4 125.6 382.5 204.9 857.6 132.9
22:24257101-24257365 24257365 1 0.02 -3.1 7 cfh ENSDARG00000075761 ENSDART00000079311 complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661] 1.4 104.1 39.6 185.0 21.1 260.5
9:21534701-21535000 21535057 1 0.02 2.4 2 PARP4 ENSDARG00000069934 ENSDART00000038257 poly (ADP-ribose) polymerase family, member 4 [Source:HGNC Symbol;Acc:271] 53.3 14.7 54.6 4.7 22.5 5.3
20:31301301-31301769 31301769 1 0.02 -1.5 -8727 n/a n/a n/a n/a 46.9 85.8 109.3 378.5 47.9 127.6
Zv9_NA727:4701-5000 4611 -1 0.03 1.7 n/a n/a n/a n/a n/a 54.0 20.4 62.8 14.2 40.8 14.5
20:51440001-51440400 51439966 -1 0.04 -1.1 -16649 n/a n/a n/a n/a 81.7 155.9 47.8 128.1 91.5 192.1
* quick link - http://q.sanger.ac.uk/plzy149a