Transcriptome profile for hu2846

Morphological Phenotype:
Control on top; Mutant below; 5 dpf

Control on top; Mutant below; 5 dpf

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Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
ventral mandibular arch
ZFA:0001273
quality
PATO:0000001
abnormal
PATO:0000460

The table belows shows the transcriptome profile for allele hu2846.

Please see our FAQs for details on the methodology. Also you can hover over each column heading below for more information.

The following regions have been identified as being significantly differentially expressed:

Region 3' end position 3' end strand Adjusted p-value Log2 fold change (mutant/sibling) Closest Ensembl gene 3' end Gene name e74 Ensembl gene ID e74 Ensembl transcript ID Gene description ret1_mut1 normalised count ret1_wt1 normalised count ret1_mut2 normalised count ret1_wt2 normalised count ret1_mut3 normalised count ret1_wt3 normalised count
25:32079501-32079818 32079818 1 1.96 × 10-07 -1.7 -2 tnni2a.1 ENSDARG00000045592 ENSDART00000033872 troponin I, skeletal, fast 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60] 161.6 637.3 110.9 271.8 97.7 312.4
13:38706301-38706700 n/a 1 2.35 × 10-06 -1.7 n/a n/a n/a n/a n/a 38.4 160.9 34.7 109.7 62.2 173.2
8:5862381-5863000 5862381 -1 4.48 × 10-06 -1.2 -2 diabloa ENSDARG00000035323 ENSDART00000051183 diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303] 390.8 989.9 196.8 461.7 290.9 555.2
13:26095101-26095500 n/a 1 7.40 × 10-06 2.0 n/a n/a n/a n/a n/a 127.2 24.3 152.4 33.4 113.3 41.8
22:311601-311736 311736 1 1.24 × 10-05 -1.3 113 n/a n/a n/a n/a 164.3 341.0 85.9 228.9 112.2 339.4
6:40676532-40677100 40676532 -1 1.43 × 10-05 -1.6 100 myhb ENSDARG00000001993 ENSDART00000026257 myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1] 102.0 375.5 90.7 310.8 86.6 187.1
16:56119901-56120100 56122673 1 6.74 × 10-05 -1.0 -1 fabp10a ENSDARG00000038439 ENSDART00000149340 fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1] 647.8 1484.1 577.9 1008.6 880.6 1713.6
22:311201-311500 311736 1 1.16 × 10-04 -1.5 113 n/a n/a n/a n/a 99.4 191.6 169.8 471.2 149.9 496.9
5:46432652-46433000 46432652 -1 2.64 × 10-04 1.7 -6 fbp2 ENSDARG00000012366 ENSDART00000019104 fructose-1, 6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23] 212.0 63.9 178.5 39.5 119.9 54.0
13:21023201-21023366 21023366 1 2.64 × 10-04 -3.7 349752 n/a n/a n/a n/a 2.6 30.7 1.9 46.2 3.3 25.2
19:16503201-16504500 16504500 1 3.16 × 10-04 1.2 -204742 n/a n/a n/a n/a 155.0 65.1 147.6 73.5 192.1 77.5
13:13123901-13124500 n/a -1 6.58 × 10-04 -2.1 n/a n/a n/a n/a n/a 11.9 60.0 21.2 66.3 8.9 58.3
13:30668901-30669000 n/a 1 6.95 × 10-04 -3.4 n/a n/a n/a n/a n/a 2.6 25.5 3.9 36.2 1.1 19.1
3:22435731-22436800 22435731 -1 1.27 × 10-03 -1.4 570 n/a n/a n/a n/a 161.6 314.2 131.2 475.1 159.9 397.7
3:33437901-33438315 33438315 1 1.62 × 10-03 1.3 119 n/a n/a n/a n/a 139.1 69.0 102.3 36.8 99.9 35.7
13:14197901-14198300 n/a -1 1.68 × 10-03 -2.2 n/a n/a n/a n/a n/a 6.6 48.5 11.6 45.1 14.4 51.3
22:307901-308170 308170 1 2.19 × 10-03 -2.2 -3453 n/a n/a n/a n/a 14.6 88.1 20.3 115.3 16.7 39.2
7:40799101-40799484 40799484 1 2.19 × 10-03 -0.9 -3 tnni2b.1 ENSDARG00000035958 ENSDART00000136736 troponin I, skeletal, fast 2b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49] 314.0 539.0 249.9 435.5 193.2 411.7
22:291201-291594 291594 1 2.29 × 10-03 -2.6 -5387 n/a n/a n/a n/a 6.6 61.3 16.4 125.3 14.4 39.2
9:34094901-34095000 34094871 -1 2.68 × 10-03 3.7 1 si:ch211-125e6.5 ENSDARG00000069381 ENSDART00000048550 si:ch211-125e6.5 [Source:ZFIN;Acc:ZDB-GENE-070912-39] 23.8 1.3 27.0 1.7 12.2 1.7
13:37885144-37885500 37885144 -1 2.94 × 10-03 -1.2 3958 n/a n/a n/a n/a 35.8 84.3 53.1 114.2 47.7 121.8
13:18643201-18643700 n/a 1 3.65 × 10-03 1.8 n/a n/a n/a n/a n/a 75.5 26.8 60.8 23.9 113.3 21.8
9:34113801-34113900 34113746 -1 4.07 × 10-03 3.9 0 zgc:172053 ENSDARG00000038321 ENSDART00000100918 zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25] 26.5 2.6 29.9 1.7 7.8 0.0
2:24070301-24070700 n/a -1 5.48 × 10-03 -1.5 n/a n/a n/a n/a n/a 30.5 83.0 12.5 39.0 23.3 65.3
13:16571101-16571342 16571342 1 5.50 × 10-03 1.7 25336 n/a n/a n/a n/a 106.0 26.8 38.6 18.9 97.7 27.8
13:16906001-16906300 n/a 1 5.77 × 10-03 -2.4 n/a n/a n/a n/a n/a 7.9 30.7 4.8 29.0 4.4 32.2
20:54989265-54989700 54989265 -1 6.01 × 10-03 1.1 -71407 n/a n/a n/a n/a 156.3 69.0 140.9 62.9 116.6 64.4
13:22758684-22759000 22758684 -1 7.38 × 10-03 -2.0 508 n/a n/a n/a n/a 10.6 53.6 20.3 50.7 13.3 67.9
6:40677201-40678000 40677176 -1 7.91 × 10-03 -2.1 -544 n/a n/a n/a n/a 18.5 108.6 24.1 178.2 46.6 103.6
22:307101-307464 307464 1 7.96 × 10-03 -1.7 -4159 n/a n/a n/a n/a 29.1 130.3 22.2 99.7 54.4 110.5
13:27367001-27367300 n/a 1 9.07 × 10-03 1.6 n/a n/a n/a n/a n/a 91.4 25.5 69.5 17.3 67.7 33.1
13:4371975-4372400 4371975 -1 9.41 × 10-03 -1.5 4354 n/a n/a n/a n/a 54.3 127.7 18.3 80.8 23.3 60.1
13:29092801-29093100 n/a 1 0.01 -2.3 n/a n/a n/a n/a n/a 6.6 49.8 5.8 34.0 10.0 29.6
13:29135401-29135942 29135942 1 0.01 -1.7 10048 n/a n/a n/a n/a 49.0 132.8 35.7 85.2 20.0 115.7
3:13877207-13877500 13877207 -1 0.01 -1.3 -1976 n/a n/a n/a n/a 30.5 93.2 17.4 50.1 65.5 135.8
13:16528901-16529100 n/a 1 0.01 -3.2 n/a n/a n/a n/a n/a 2.6 24.3 3.9 23.4 1.1 20.0
13:17799501-17800000 17799465 -1 0.02 -2.4 1374 n/a n/a n/a n/a 4.0 42.1 7.7 26.2 8.9 40.0
22:34560401-34560800 n/a 1 0.02 1.3 n/a n/a n/a n/a n/a 107.3 37.0 60.8 31.2 76.6 29.6
13:27348101-27348293 27348293 1 0.02 1.9 81069 n/a n/a n/a n/a 82.1 29.4 28.9 11.1 87.7 13.9
13:32850886-32851300 32850886 -1 0.02 1.0 160 n/a n/a n/a n/a 288.8 176.3 352.1 140.3 328.7 172.3
13:5240001-5240500 n/a -1 0.02 1.0 n/a n/a n/a n/a n/a 131.2 58.8 200.7 99.7 118.8 68.8
22:336201-336469 336469 1 0.02 -2.2 -2012 n/a n/a n/a n/a 9.3 48.5 14.5 88.6 11.1 24.4
13:10918630-10918900 10918630 -1 0.02 1.2 150003 n/a n/a n/a n/a 99.4 34.5 85.9 41.2 94.4 47.0
4:46209901-46210100 n/a 1 0.02 -3.6 n/a n/a n/a n/a n/a 2.6 23.0 1.0 9.5 1.1 25.2
22:277801-278087 278087 1 0.03 -2.5 2471 n/a n/a n/a n/a 7.9 72.8 16.4 119.7 15.5 33.1
7:2656401-2656900 2656401 -1 0.03 -1.3 -19265 n/a n/a n/a n/a 21.2 56.2 23.2 58.5 28.9 67.0
13:18634301-18634500 n/a 1 0.03 -3.2 n/a n/a n/a n/a n/a 1.3 19.2 2.9 16.2 2.2 22.6
13:30588501-30588782 30588782 1 0.03 0.9 113323 n/a n/a n/a n/a 137.8 83.0 196.8 108.0 169.9 84.4
9:43900018-43901200 43900018 -1 0.03 -0.8 2149 n/a n/a n/a n/a 906.1 1766.4 983.1 2106.3 1379.2 1996.5
13:11064235-11064600 11064235 -1 0.03 1.1 4398 n/a n/a n/a n/a 67.6 31.9 110.9 53.5 97.7 47.9
22:275601-276494 276494 1 0.03 -1.7 878 n/a n/a n/a n/a 123.2 691.0 160.1 691.7 308.7 530.9
13:14263001-14263200 n/a -1 0.03 -2.8 n/a n/a n/a n/a n/a 4.0 21.7 1.9 16.2 2.2 20.0
12:40518401-40518600 40518623 1 0.03 1.9 -17205 n/a n/a n/a n/a 80.8 24.3 52.1 9.5 14.4 7.0
10:11178201-11178800 n/a -1 0.04 1.1 n/a n/a n/a n/a n/a 76.8 35.8 74.3 38.4 112.2 50.5
13:16656801-16657238 16657238 1 0.04 0.9 111232 n/a n/a n/a n/a 321.9 131.6 180.4 98.0 360.9 223.7
13:38726401-38726700 n/a 1 0.04 -1.7 n/a n/a n/a n/a n/a 15.9 75.4 25.1 50.1 24.4 81.8
16:13564516-13565900 13564516 -1 0.04 0.9 -23541 n/a n/a n/a n/a 136.4 77.9 167.9 99.1 212.1 102.7
13:45625601-45626300 n/a -1 0.04 -1.2 n/a n/a n/a n/a n/a 13.2 40.9 31.8 75.7 84.4 172.3
13:36338901-36339170 36339170 1 0.04 -2.3 -16025 n/a n/a n/a n/a 4.0 26.8 4.8 24.5 5.6 20.9
13:14014701-14014900 n/a 1 0.04 -2.9 n/a n/a n/a n/a n/a 1.3 23.0 4.8 19.5 3.3 29.6
6:22180301-22180700 n/a -1 0.04 1.4 n/a n/a n/a n/a n/a 47.7 17.9 39.6 15.0 58.9 24.4
9:44139001-44139300 n/a -1 0.04 2.1 n/a n/a n/a n/a n/a 22.5 5.1 23.2 4.5 22.2 6.1
* quick link - http://q.sanger.ac.uk/blp3859r