GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Brain structure

The human homologues of the following genes have been identified in "Brain structure" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
boka BOK ENSDARG00000052129 None Not determined 1
bokb BOK ENSDARG00000008807 1 Not determined 1
cadps2 CADPS2 ENSDARG00000013312 6 Not determined 1
FARP1 (2 of 2) FARP1 ENSDARG00000063695 1 Not determined 5
fbxw8 FBXW8 ENSDARG00000079089 None Not determined 1
frmd6 FRMD6 ENSDARG00000002332 2 Not determined 4
hmga2 HMGA2 ENSDARG00000069912 None Not determined 18
LOC100004008 RBBP6 ENSDARG00000070812 1 Not determined 2
LOC100004867 RBBP6 ENSDARG00000094884 None Not determined 2
LOC100005013 RBBP6 ENSDARG00000088009 None Not determined 2
LOC100005062 RBBP6 ENSDARG00000090197 None Not determined 2
LOC100005157 RBBP6 ENSDARG00000092356 None Not determined 2
LOC100148590 RBBP6 ENSDARG00000088658 None Not determined 2
LOC100149814 RBBP6 ENSDARG00000087708 None Not determined 2
LOC100334833 HMGA2 ENSDARG00000091038 None Not determined 18
Q08B91_DANRE GLYATL3 ENSDARG00000051954 None Not determined 1
rbbp6l RBBP6 ENSDARG00000037919 5 Not determined 2
si:ch211-153a8.3 WFDC2 ENSDARG00000089187 1 Not determined 1
si:ch211-198k9.6 RBBP6 ENSDARG00000069804 None Not determined 2
si:ch211-235f1.1 FARP1 ENSDARG00000074381 4 Not determined 5
si:ch211-46o5.1 CSMD2 ENSDARG00000001559 12 Not determined 5
si:ch211-62a1.3 SPINT3 ENSDARG00000092534 None Not determined 1
si:dkey-117n7.5 SPINT3 ENSDARG00000089640 1 Normal 1
si:dkey-76k16.5 GLYATL3 ENSDARG00000075561 1 Not determined 1
si:dkey-76k16.6 GLYATL3 ENSDARG00000077481 None Not determined 1
si:dkey-7c22.1 KIAA0090 ENSDARG00000057255 6 Not determined 1
si:rp71-45g20.10 RBBP6 ENSDARG00000056907 None Not determined 2
si:rp71-45g20.11 RBBP6 ENSDARG00000094291 None Not determined 2
si:rp71-45g20.4 RBBP6 ENSDARG00000056917 None Not determined 2
thap4 THAP4 ENSDARG00000077323 1 Not determined 1
zgc:173948 RBBP6 ENSDARG00000058527 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000092670 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000092675 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000092821 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093017 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093329 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093439 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093508 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093654 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093736 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093920 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000093935 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094032 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094049 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094363 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094532 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094717 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094733 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094765 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000094940 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000095028 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000095166 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000095172 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000095285 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000095367 None Not determined 2
zgc:173948 RBBP6 ENSDARG00000095490 None Not determined 2
zgc:174353 RBBP6 ENSDARG00000090104 None Not determined 2
zgc:174354 RBBP6 ENSDARG00000094196 1 Not determined 2
zgc:174354 RBBP6 ENSDARG00000095000 None Not determined 2
zgc:174354 RBBP6 ENSDARG00000095491 None Not determined 2
zgc:174355 RBBP6 ENSDARG00000093221 None Not determined 2
zgc:174356 RBBP6 ENSDARG00000079615 None Not determined 2
zgc:174463 RBBP6 ENSDARG00000056266 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000087125 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000088604 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000090522 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000091883 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000093481 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000094122 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000094864 None Not determined 2
zgc:77614 RBBP6 ENSDARG00000095575 None Not determined 2
zgc:91850 RBBP6 ENSDARG00000086077 None Not determined 2
zgc:91850 RBBP6 ENSDARG00000089182 None Not determined 2
zgc:92502 AKR7L ENSDARG00000016649 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • HRK
  • MRT04
  • SHB
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