GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of brain lesion distribution in multiple sclerosis.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ARHGEF10 ARHGEF10 ENSDARG00000077788 1 Not determined 1
arl11 ARL11 ENSDARG00000036637 1 Not determined 1
dsc2l DSC1 ENSDARG00000039677 2 Not determined 1
egfl6 EGFL6 ENSDARG00000045958 2 Not determined 1
HACE1 HACE1 ENSDARG00000062280 4 Not determined 6
si:ch211-121h11.2 SAMD12 ENSDARG00000069973 None Not determined 1
tll1 TLL1 ENSDARG00000037429 2 1 phenotype 2
vti1a VTI1A ENSDARG00000045065 None Not determined 3
zgc:63990 TMEM47 ENSDARG00000057322 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • AK127238
  • LOC285501
  • LOC339788
  • MMP10
  • MRGPRE
  • NAP5
  • RNASEL
* quick link - http://q.sanger.ac.uk/i0cmlmk2