GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study of patient-rated and clinician-rated global impression of severity during antipsychotic treatment.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
atp1a2a ATP1A2 ENSDARG00000010472 4 Not determined 1
cd40 TNFRSF11A ENSDARG00000054968 None Not determined 6
LOC100333821 TNFRSF11A ENSDARG00000087804 None Not determined 6
LOC795858 TNFRSF11A ENSDARG00000095718 None Not determined 6
ngfr TNFRSF11A ENSDARG00000057143 1 Not determined 6
pde4d PDE4D ENSDARG00000032761 5 Not determined 7
ppa2 PPA2 ENSDARG00000009685 2 Not determined 2
si:ch211-261n11.7 TNFRSF11A ENSDARG00000068966 None Not determined 6
si:ch211-261n11.8 TNFRSF11A ENSDARG00000089901 None Not determined 6
si:dkey-23c22.5 TNFRSF11A ENSDARG00000092892 1 Not determined 6
si:dkey-23c22.6 TNFRSF11A ENSDARG00000068991 None Not determined 6
si:dkey-23c22.7 TNFRSF11A ENSDARG00000095193 None Not determined 6
si:dkey-23c22.9 TNFRSF11A ENSDARG00000092381 None Not determined 6
si:dkey-33l14.1 TJP1 ENSDARG00000079374 3 Not determined 2
spopla SPOPL ENSDARG00000010563 None Not determined 1
spoplb SPOPL ENSDARG00000003974 None Not determined 1
tjp1 TJP1 ENSDARG00000077506 3 Not determined 2
zgc:153631 TNFRSF11A ENSDARG00000068993 1 Not determined 6
zgc:153759 TNFRSF11A ENSDARG00000068969 None Not determined 6
zgc:158862 TNFRSF11A ENSDARG00000068963 None Not determined 6
* quick link - http://q.sanger.ac.uk/b7ig0mbz