GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

White matter integrity as an intermediate phenotype: exploratory genome-wide association analysis in individuals at high risk of bipolar disorder.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
adam28 ADAM7 ENSDARG00000035514 1 Not determined 1
adamts9 ADAMTS9 ENSDARG00000077778 5 Not determined 5
agl AGL ENSDARG00000012709 2 Not determined 1
AGL (3 of 3) AGL ENSDARG00000071488 1 Not determined 1
camk2d1 CAMK2D ENSDARG00000043010 1 Not determined 1
camk2d2 CAMK2D ENSDARG00000014273 4 Not determined 1
CARD11 CARD11 ENSDARG00000052741 5 Not determined 3
crbn CRBN ENSDARG00000054250 None Not determined 2
FRRS1 (3 of 3) FRRS1 ENSDARG00000077605 4 Not determined 1
gna12 GNA12 ENSDARG00000025826 None Not determined 7
im:7145503 AGL ENSDARG00000016491 4 Not determined 1
LOC555347 FRRS1 ENSDARG00000069022 None Not determined 1
LOC797518 GNA12 ENSDARG00000037619 None Not determined 7
lpp LPP ENSDARG00000023578 1 Not determined 10
si:ch211-153l6.2 FRRS1 ENSDARG00000076183 None Not determined 1
si:ch211-267e7.2 FRRS1 ENSDARG00000060622 None Not determined 1
si:dkeyp-192m14.7 EPS15L1 ENSDARG00000042670 3 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • AK095310
  • AK127888
  • AS2
  • C20orf141
  • MIR548A2
  • TMEM239
* quick link - http://q.sanger.ac.uk/yktdrkks