GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
A1A5I3_DANRE ITGAL ENSDARG00000044670 2 Not determined 1
ACSL6 ACSL6 ENSDARG00000060317 None Not determined 2
ada ADA ENSDARG00000003113 None Not determined 1
adcy3 ADCY3 ENSDARG00000017437 2 Not determined 6
ADCY3 (1 of 2) ADCY3 ENSDARG00000077145 None Not determined 6
adcy7 ADCY7 ENSDARG00000060070 2 Normal 1
akap9 CEP250 ENSDARG00000079610 3 Not determined 2
ARHGAP30 (2 of 2) ARHGAP30 ENSDARG00000074619 None Not determined 1
ARHGAP30 (1 of 2) ARHGAP30 ENSDARG00000079744 None Not determined 1
arpc2 ARPC2 ENSDARG00000075989 1 Not determined 2
atf4b1 ATF4 ENSDARG00000039515 1 Not determined 1
atf4b2 ATF4 ENSDARG00000038141 None Not determined 1
atg16l1 ATG16L1 ENSDARG00000057430 None Not determined 8
bre BRE ENSDARG00000038863 2 Not determined 1
BSN (2 of 2) BSN ENSDARG00000079822 17 Not determined 4
BSN (1 of 2) BSN ENSDARG00000079161 6 Not determined 4
calm2b CALM3 ENSDARG00000044537 None Not determined 1
calm3a CALM3 ENSDARG00000015050 None Not determined 1
calm3a CALM3 ENSDARG00000021811 1 Not determined 1
calm3a CALM3 ENSDARG00000074057 None Not determined 1
calm3b CALM3 ENSDARG00000031427 None Not determined 1
CARD11 CARD11 ENSDARG00000052741 5 Not determined 3
card9 CARD9 ENSDARG00000067672 2 Not determined 9
ccr6a CCR6 ENSDARG00000087474 1 Not determined 7
ccr6b CCR6 ENSDARG00000038968 2 Not determined 7
cd226 CD226 ENSDARG00000045391 None Not determined 5
cebpb CEBPB ENSDARG00000042725 1 Not determined 1
cebpg CEBPG ENSDARG00000036073 1 Not determined 1
cpeb4 CPEB4 ENSDARG00000056691 None Not determined 4
CPEB4 (1 of 3) CPEB4 ENSDARG00000060495 None Not determined 4
crfb4 IL10RB ENSDARG00000068711 1 Not determined 1
crfb4 IFNGR2 ENSDARG00000068711 1 Not determined 3
crfb5 IFNAR1 ENSDARG00000078042 None Not determined 1
CRTC3 CRTC3 ENSDARG00000052114 3 Not determined 2
ctdsp1 CTDSP1 ENSDARG00000040674 3 Not determined 1
ctsz CTSZ ENSDARG00000043081 None Not determined 2
cxcr3.2 CXCR5 ENSDARG00000041041 3 Not determined 4
D9IL85_DANRE IL10RB ENSDARG00000075776 None Not determined 1
D9IL85_DANRE IFNGR2 ENSDARG00000075776 None Not determined 3
dldh DLD ENSDARG00000008785 None Not determined 3
dnmt3 DNMT3B ENSDARG00000057830 5 Not determined 1
dnmt4 DNMT3B ENSDARG00000036791 2 Not determined 1
dnmt5 DNMT3B ENSDARG00000057863 6 Not determined 1
dnmt7 DNMT3B ENSDARG00000052402 1 Not determined 1
eif3c EIF3C ENSDARG00000016443 None Not determined 3
epo EPO ENSDARG00000055163 None Not determined 2
F100A_DANRE LITAF ENSDARG00000076069 None Not determined 4
f11r F11R ENSDARG00000017320 None Not determined 1
fads2 FADS2 ENSDARG00000019532 None Not determined 15
faslg FASLG ENSDARG00000011520 None Not determined 3
flrt1a FLRT1 ENSDARG00000077556 1 Normal 1
flrt1b FLRT1 ENSDARG00000075597 1 Not determined 1
fos FOS ENSDARG00000031683 None Not determined 2
fosl1 FOSL1 ENSDARG00000015355 None Not determined 1
FOSL1 (3 of 3) FOSL1 ENSDARG00000087620 None Not determined 1
fosl2 FOSL2 ENSDARG00000040623 None Not determined 2
fyna FYN ENSDARG00000011370 1 Not determined 1
fynb FYN ENSDARG00000025319 3 Not determined 1
galca GALC ENSDARG00000037064 1 Not determined 3
galcb GALC ENSDARG00000016474 3 Not determined 3
gart GART ENSDARG00000051855 None Not determined 1
gna12 GNA12 ENSDARG00000025826 None Not determined 7
gpr18 GPR18 ENSDARG00000062009 None Not determined 1
gpr183 GPR183 ENSDARG00000010317 None Not determined 1
GPR183 (3 of 3) GPR183 ENSDARG00000069756 None Not determined 1
GPR65 GPR65 ENSDARG00000045957 None Not determined 3
gpx1a GPX1 ENSDARG00000018146 None Not determined 2
gpx1b GPX1 ENSDARG00000006207 1 Not determined 2
gpx4a GPX4 ENSDARG00000068478 2 Not determined 2
gpx4b GPX4 ENSDARG00000076836 None Not determined 2
hmha1 HMHA1 ENSDARG00000062049 1 Not determined 1
HMHA1 (3 of 3) HMHA1 ENSDARG00000052496 4 Not determined 1
hnf4a HNF4A ENSDARG00000021494 None Not determined 8
hsp70l HSPA6 ENSDARG00000021924 None Not determined 2
hsp70l HSPA6 ENSDARG00000055723 None Not determined 2
ifih1 IFIH1 ENSDARG00000018553 1 Not determined 7
ikzf1 IKZF1 ENSDARG00000013539 3 Not determined 10
il10 IL10 ENSDARG00000078147 3 Normal 11
il12ba IL12B ENSDARG00000033727 1 Not determined 14
il12rb2 IL12RB2 ENSDARG00000052157 None Not determined 7
IL12RB2 (1 of 2) IL12RB2 ENSDARG00000093809 None Not determined 7
il12rb2l IL12RB2 ENSDARG00000074850 None Not determined 7
il23r IL12RB2 ENSDARG00000052158 1 Not determined 7
il34 IL19 ENSDARG00000090344 None Not determined 4
il34 IL20 ENSDARG00000090344 None Not determined 1
il34 IL24 ENSDARG00000090344 None Not determined 1
il6st IL6ST ENSDARG00000030498 4 Normal 3
il8 IL8 ENSDARG00000094963 None Not determined 1
ip6k2 IP6K2 ENSDARG00000008310 1 Not determined 1
ipmk IPMK ENSDARG00000076699 None Not determined 2
irf1 IRF1 ENSDARG00000043492 None Not determined 6
irf11 IRF1 ENSDARG00000032768 None Not determined 6
irf5 IRF5 ENSDARG00000045681 None Not determined 14
irf8 IRF8 ENSDARG00000056407 None Not determined 9
irgf1 IRGM ENSDARG00000070774 3 Not determined 5
irgf2 IRGM ENSDARG00000092249 1 Not determined 5
irgf3 IRGM ENSDARG00000062820 None Not determined 5
irgq2 IRGM ENSDARG00000068657 None Not determined 5
itln1 ITLN1 ENSDARG00000007534 None Not determined 3
itln2 ITLN1 ENSDARG00000036084 None Not determined 3
itln2 ITLN1 ENSDARG00000093796 None Not determined 3
itln3 ITLN1 ENSDARG00000003523 1 Not determined 3
itln4 ITLN1 ENSDARG00000053630 2 Normal 3
itpka ITPKA ENSDARG00000042856 3 Not determined 1
jak2a JAK2 ENSDARG00000007915 1 Not determined 8
jak2b JAK2 ENSDARG00000018882 2 Not determined 8
jazf1a JAZF1 ENSDARG00000036243 1 Not determined 8
jazf1b JAZF1 ENSDARG00000056793 None Not determined 8
ldb3b PDLIM4 ENSDARG00000019202 None Not determined 2
litaf LITAF ENSDARG00000052666 None Not determined 4
LOC100000685 SLC22A4 ENSDARG00000068603 2 Not determined 5
LOC100000685 SLC22A5 ENSDARG00000068603 2 Not determined 5
LOC100001799 IL12B ENSDARG00000069504 None Not determined 14
LOC100002448 MST1R ENSDARG00000060235 5 Not determined 1
LOC100150844 PRKCD ENSDARG00000070651 3 Not determined 3
LOC100329651 MUC19 ENSDARG00000057436 None Not determined 3
LOC100330293 GPR35 ENSDARG00000086776 1 Not determined 3
LOC100330352 TNFRSF9 ENSDARG00000087225 1 Not determined 3
LOC100331766 MANBA ENSDARG00000079520 None Not determined 2
LOC100332507 CEP250 ENSDARG00000086540 1 Not determined 2
LOC100332846 ACSL6 ENSDARG00000078399 3 Not determined 2
LOC100333151 CPEB4 ENSDARG00000074474 1 Not determined 4
LOC100333521 CTSZ ENSDARG00000052350 None Not determined 2
LOC100333801 MTMR3 ENSDARG00000089046 3 Not determined 6
LOC100333972 DOK3 ENSDARG00000086910 None Not determined 1
LOC100334078 GPR35 ENSDARG00000075877 None Not determined 3
LOC555649 SP140 ENSDARG00000090449 3 Not determined 4
LOC556314 TTYH3 ENSDARG00000034473 3 Not determined 1
LOC558432 SPRED2 ENSDARG00000052435 2 Not determined 3
LOC560703 MMEL1 ENSDARG00000026398 2 Not determined 6
LOC563727 MAP3K8 ENSDARG00000061710 1 Not determined 1
LOC564478 IP6K1 ENSDARG00000073744 1 Not determined 1
LOC564958 ITLN1 ENSDARG00000095082 1 Not determined 3
LOC565124 ITLN1 ENSDARG00000036085 None Not determined 3
LOC566927 TMBIM1 ENSDARG00000090534 None Not determined 1
LOC570238 FOS ENSDARG00000040135 None Not determined 2
LOC570502 KIF21B ENSDARG00000009733 8 Not determined 5
LOC571285 RPS6KA2 ENSDARG00000028469 2 Not determined 2
LOC793832 KIAA1841 ENSDARG00000079857 4 Not determined 2
LOC794555 NFKBIL1 ENSDARG00000003157 1 Not determined 2
LOC795858 TNFRSF4 ENSDARG00000095718 None Not determined 1
LOC796724 CXCR1 ENSDARG00000054975 1 Not determined 2
LOC796724 CXCR2 ENSDARG00000054975 1 Not determined 2
LOC797181 CXCR2 ENSDARG00000052088 1 Not determined 2
LOC797181 CXCR1 ENSDARG00000052088 1 Not determined 2
LOC797518 GNA12 ENSDARG00000037619 None Not determined 7
LOC799019 CXCR5 ENSDARG00000010514 1 Not determined 4
LOC799279 IL1RL1 ENSDARG00000090844 None Not determined 8
LOC799279 IL1R1 ENSDARG00000090844 None Not determined 2
LOC799279 IL1RL2 ENSDARG00000090844 None Not determined 2
LRRK2 LRRK2 ENSDARG00000006169 6 Not determined 8
MAML2 MAML2 ENSDARG00000076326 3 Not determined 5
manba MANBA ENSDARG00000008238 None Not determined 2
mapk1 MAPK1 ENSDARG00000027552 None Not determined 2
mapkapk2a MAPKAPK2 ENSDARG00000002552 3 Not determined 1
mapkapk2b MAPKAPK2 ENSDARG00000018530 4 Not determined 1
mhc1uba MICB ENSDARG00000075963 None Not determined 7
mhc1ze MICB ENSDARG00000074765 None Not determined 7
mhc1zel MICB ENSDARG00000092162 1 Not determined 7
mhc2dab HLA-DRB1 ENSDARG00000079105 None Not determined 35
mhc2dab HLA-DQB1 ENSDARG00000079105 None Not determined 24
mmp9 MMP9 ENSDARG00000042816 1 Not determined 1
msto1 MSTO1 ENSDARG00000024381 1 Not determined 1
ndfip1 NDFIP1 ENSDARG00000013979 None Not determined 4
ndfip1l NDFIP1 ENSDARG00000008057 None Not determined 4
ndufaf1 NDUFAF1 ENSDARG00000025549 None Not determined 1
nfil3 NFIL3 ENSDARG00000042977 1 Not determined 1
ngfr TNFRSF4 ENSDARG00000057143 1 Not determined 1
nkx2.3 NKX2-3 ENSDARG00000039095 1 Not determined 10
nkx2.7 NKX2-3 ENSDARG00000021232 1 1 phenotype 10
nod2 NOD2 ENSDARG00000010756 3 Not determined 10
nos2b NOS2 ENSDARG00000031976 2 Normal 2
NP_001020335.1 ITIH4 ENSDARG00000024928 None Not determined 4
NP_001091732.1 HLA-DRB1 ENSDARG00000071168 1 Not determined 35
NP_001091732.1 HLA-DQB1 ENSDARG00000071168 1 Not determined 24
NP_001183994.1 NFIL3 ENSDARG00000043237 None Not determined 1
NP_694512.1 MST1 ENSDARG00000031855 1 Not determined 9
NP_919406.1 MICB ENSDARG00000086877 2 Not determined 7
nupr1 NUPR1 ENSDARG00000094557 None Not determined 2
nusap1 NUSAP1 ENSDARG00000002403 None Not determined 1
pdlim4 PDLIM4 ENSDARG00000068973 1 Not determined 2
pfkfb4 PFKFB4 ENSDARG00000055540 None Not determined 1
pfkfb4l PFKFB4 ENSDARG00000029075 None Not determined 1
phactr2 PHACTR2 ENSDARG00000027172 1 Not determined 4
PIGR PIGR ENSDARG00000091288 1 Not determined 1
plcl1 PLCL1 ENSDARG00000067676 2 Not determined 7
pltp PLTP ENSDARG00000035768 1 Not determined 5
pmpca PMPCA ENSDARG00000070566 1 Not determined 1
pnkd PNKD ENSDARG00000071032 None Not determined 1
ppan PPAN-P2RY11 ENSDARG00000022232 None Not determined 1
prkcba PRKCB ENSDARG00000008723 2 Not determined 1
prkcbb PRKCB ENSDARG00000022254 2 Not determined 1
prkcd PRKCD ENSDARG00000009208 1 Not determined 3
ptger4a PTGER4 ENSDARG00000059236 1 Normal 12
ptger4b PTGER4 ENSDARG00000035415 1 Not determined 12
ptpn22 PTPN22 ENSDARG00000075062 5 Not determined 17
Q8MHB3_DANRE MICB ENSDARG00000076734 None Not determined 7
Q8MHB6_DANRE MICB ENSDARG00000088022 None Not determined 7
RASSF5 RASSF5 ENSDARG00000070601 None Not determined 1
rel REL ENSDARG00000055276 5 Not determined 10
rela RELA ENSDARG00000021907 2 Not determined 1
rev3l REV3L ENSDARG00000058801 6 Not determined 1
rftn2 RFTN2 ENSDARG00000056078 2 Not determined 1
ripk2 RIPK2 ENSDARG00000033713 None Not determined 3
rit1 RIT1 ENSDARG00000069150 None Not determined 2
rnaset2 RNASET2 ENSDARG00000036282 1 Not determined 3
rnaset2l RNASET2 ENSDARG00000058413 None Not determined 3
RORC RORC ENSDARG00000087195 3 Not determined 1
rps6kb1 RPS6KB1 ENSDARG00000058230 3 Not determined 3
si:busm1-104n07.3 HLA-DRB1 ENSDARG00000074510 1 Normal 35
si:busm1-104n07.3 HLA-DQB1 ENSDARG00000074510 1 Normal 24
si:busm1-160c18.1 HLA-DQA1 ENSDARG00000053739 None Not determined 27
si:busm1-160c18.1 HLA-DRA ENSDARG00000053739 None Not determined 21
si:busm1-160c18.3 HLA-DRB1 ENSDARG00000053738 None Not determined 35
si:busm1-160c18.3 HLA-DQB1 ENSDARG00000053738 None Not determined 24
si:busm1-160c18.3 HLA-DRB1 ENSDARG00000093706 None Not determined 35
si:busm1-160c18.3 HLA-DQB1 ENSDARG00000093706 None Not determined 24
si:busm1-194e12.11 HLA-DQA1 ENSDARG00000055441 None Not determined 27
si:busm1-194e12.11 HLA-DRA ENSDARG00000055441 None Not determined 21
si:busm1-194e12.12 HLA-DRB1 ENSDARG00000055447 None Not determined 35
si:busm1-194e12.12 HLA-DQB1 ENSDARG00000055447 None Not determined 24
si:busm1-228j01.3 HLA-DQA1 ENSDARG00000086294 3 Not determined 27
si:busm1-228j01.3 HLA-DRA ENSDARG00000086294 3 Not determined 21
si:busm1-228j01.4 HLA-DRB1 ENSDARG00000088872 1 Not determined 35
si:busm1-228j01.4 HLA-DQB1 ENSDARG00000088872 1 Not determined 24
si:busm1-228j01.5 HLA-DQA1 ENSDARG00000079593 1 Not determined 27
si:busm1-228j01.5 HLA-DRA ENSDARG00000079593 1 Not determined 21
si:busm1-228j01.6 HLA-DQB1 ENSDARG00000041705 None Not determined 24
si:busm1-228j01.6 HLA-DRB1 ENSDARG00000041705 None Not determined 35
si:ch1073-210b3.1 TNFRSF6B ENSDARG00000034243 None Not determined 4
si:ch1073-403i13.1 HLA-DQA1 ENSDARG00000001832 None Not determined 27
si:ch1073-403i13.1 HLA-DRA ENSDARG00000001832 None Not determined 21
si:ch1073-409b12.4 SLC22A4 ENSDARG00000094112 None Not determined 5
si:ch1073-409b12.4 SLC22A5 ENSDARG00000094112 None Not determined 5
si:ch211-153j24.3 FOS ENSDARG00000068428 None Not determined 2
si:ch211-196g2.5 SULT1A1 ENSDARG00000094996 1 Not determined 2
si:ch211-196g2.5 SULT1A2 ENSDARG00000094996 1 Not determined 3
si:ch211-196g2.6 SULT1A1 ENSDARG00000079079 2 Not determined 2
si:ch211-196g2.6 SULT1A2 ENSDARG00000079079 2 Not determined 3
si:ch211-199o1.2 HSPA6 ENSDARG00000056210 None Not determined 2
si:ch211-200e2.4 HCK ENSDARG00000058647 1 Not determined 1
si:ch211-213n8.3 IL12B ENSDARG00000054542 1 Not determined 14
si:ch211-220f16.2 CEP250 ENSDARG00000007976 2 Not determined 2
si:ch211-234e14.2 PTGER4 ENSDARG00000079907 None Not determined 12
si:ch211-251b21.2 PLCH2 ENSDARG00000059960 1 Not determined 2
si:ch211-261n11.7 TNFRSF4 ENSDARG00000068966 None Not determined 1
si:ch211-261n11.8 TNFRSF4 ENSDARG00000089901 None Not determined 1
si:ch211-274c22.6 TNFAIP3 ENSDARG00000027777 4 Not determined 11
si:ch211-287j19.6 MICB ENSDARG00000001470 1 Not determined 7
si:ch211-59c24.1 TSPAN33 ENSDARG00000042189 1 Not determined 1
si:ch211-59d15.4 FOS ENSDARG00000092174 None Not determined 2
si:ch211-59d15.4 FOSL2 ENSDARG00000092174 None Not determined 2
si:ch211-59d15.4 FOSL1 ENSDARG00000092174 None Not determined 1
si:ch211-89p1.1 F11R ENSDARG00000068114 None Not determined 1
si:ch73-100n10.1 MTMR3 ENSDARG00000093364 2 Not determined 6
si:ch73-191k20.2 SOCS1 ENSDARG00000089873 None Not determined 3
si:ch73-194h10.1 INPP5D ENSDARG00000074283 1 Not determined 2
si:ch73-211l2.3 HLA-DQA1 ENSDARG00000075932 1 Not determined 27
si:ch73-211l2.3 HLA-DRA ENSDARG00000075932 1 Not determined 21
si:ch73-213j4.4 MICB ENSDARG00000092731 None Not determined 7
si:ch73-233m11.2 NOD2 ENSDARG00000091859 None Not determined 10
si:ch73-243b8.4 HMHA1 ENSDARG00000095174 None Not determined 1
si:ch73-362g18.2 CREB5 ENSDARG00000070536 None Not determined 4
si:dkey-108d22.4 BSN ENSDARG00000063299 9 Normal 4
si:dkey-109n11.1 DBP ENSDARG00000063014 2 Not determined 2
si:dkey-11f4.14 CD48 ENSDARG00000093308 None Not determined 1
si:dkey-11f4.16 CD48 ENSDARG00000076224 None Not determined 1
si:dkey-121a9.3 C1orf53 ENSDARG00000071439 None Not determined 1
si:dkey-149m16.2 RPS6KB1 ENSDARG00000018399 1 Not determined 3
si:dkey-172o19.2 NFIL3 ENSDARG00000071398 None Not determined 1
si:dkey-172o19.3 NFIL3 ENSDARG00000092346 None Not determined 1
si:dkey-177e13.4 CREM ENSDARG00000023217 1 Not determined 2
si:dkey-17e16.12 FOSL1 ENSDARG00000079373 None Not determined 1
si:dkey-18n13.4 CISD1 ENSDARG00000079516 None Not determined 1
si:dkey-1o2.3 SDCCAG3 ENSDARG00000095515 None Not determined 2
si:dkey-206m15.8 TNNI2 ENSDARG00000092999 None Not determined 1
si:dkey-217m5.3 CCL13 ENSDARG00000041919 None Not determined 2
si:dkey-217m5.3 CCL11 ENSDARG00000041919 None Not determined 2
si:dkey-217m5.3 CCL2 ENSDARG00000041919 None Not determined 4
si:dkey-22o12.5 GPR183 ENSDARG00000074302 None Not determined 1
si:dkey-230p4.1 CEP250 ENSDARG00000020834 5 Not determined 2
si:dkey-23c22.5 TNFRSF4 ENSDARG00000092892 1 Not determined 1
si:dkey-23c22.6 TNFRSF4 ENSDARG00000068991 None Not determined 1
si:dkey-23c22.7 TNFRSF4 ENSDARG00000095193 None Not determined 1
si:dkey-23c22.9 TNFRSF4 ENSDARG00000092381 None Not determined 1
si:dkey-24n17.6 ERAP1 ENSDARG00000013024 1 Not determined 7
si:dkey-266j7.1 BSN ENSDARG00000012482 11 Not determined 4
si:dkey-273o13.5 RPS6KA4 ENSDARG00000044436 2 Not determined 3
si:dkey-31b16.12 MLH3 ENSDARG00000056334 6 Not determined 1
si:dkey-40m6.13 SPHK2 ENSDARG00000069893 None Not determined 2
si:dkey-52h23.1 NFIL3 ENSDARG00000094965 None Not determined 1
si:dkey-57m14.4 NOS2 ENSDARG00000026925 2 Not determined 2
si:dkey-8e10.2 CD6 ENSDARG00000069542 3 Not determined 4
si:dkeyp-2h4.2 HLA-DQA1 ENSDARG00000031745 None Not determined 27
si:dkeyp-2h4.2 HLA-DRA ENSDARG00000031745 None Not determined 21
si:dkeyp-59a8.1 CCL2 ENSDARG00000041923 None Not determined 4
si:dkeyp-59a8.1 CCL13 ENSDARG00000041923 None Not determined 2
si:dkeyp-59a8.1 CCL11 ENSDARG00000041923 None Not determined 2
si:dkeyp-59a8.2 CCL13 ENSDARG00000041835 None Not determined 2
si:dkeyp-59a8.2 CCL11 ENSDARG00000041835 None Not determined 2
si:dkeyp-59a8.2 CCL2 ENSDARG00000041835 None Not determined 4
si:dkeyp-59a8.3 CCL13 ENSDARG00000041917 None Not determined 2
si:dkeyp-59a8.3 CCL11 ENSDARG00000041917 None Not determined 2
si:dkeyp-59a8.3 CCL2 ENSDARG00000041917 None Not determined 4
si:dkeyp-69b9.5 DBP ENSDARG00000057652 4 Normal 2
si:dkeyp-75b4.8 LITAF ENSDARG00000077542 None Not determined 4
si:rp71-15d4.1 LPXN ENSDARG00000079315 None Not determined 2
si:zfos-2070c2.1 HLA-DQA1 ENSDARG00000070206 None Not determined 27
si:zfos-2070c2.1 HLA-DRA ENSDARG00000070206 None Not determined 21
si:zfos-2070c2.3 HLA-DRB1 ENSDARG00000076307 None Not determined 35
si:zfos-2070c2.3 HLA-DQB1 ENSDARG00000076307 None Not determined 24
si:zfos-367g9.1 HLA-DRA ENSDARG00000074816 1 Not determined 21
si:zfos-367g9.1 HLA-DQA1 ENSDARG00000074816 1 Not determined 27
slc10a4 SLC10A4 ENSDARG00000009131 None Not determined 1
slc11a2 SLC11A1 ENSDARG00000024295 None Not determined 2
slc22a4 SLC22A5 ENSDARG00000005335 2 Not determined 5
slc22a4 SLC22A4 ENSDARG00000005335 2 Not determined 5
slc2a4rg SLC2A4RG ENSDARG00000077762 5 Not determined 3
slc9a3.1 SLC9A3 ENSDARG00000058498 2 Not determined 1
slc9a3.2 SLC9A3 ENSDARG00000036722 2 Normal 1
smad3a SMAD3 ENSDARG00000036096 1 Not determined 5
smad3b SMAD3 ENSDARG00000010207 1 Not determined 5
smad7 SMAD7 ENSDARG00000016858 None Not determined 7
socs1 SOCS1 ENSDARG00000038095 None Not determined 3
spred1 SPRED1 ENSDARG00000041449 2 Not determined 1
spred2 SPRED2 ENSDARG00000008372 None Not determined 3
spry4 SPRY4 ENSDARG00000068732 None Not determined 3
stat1a STAT1 ENSDARG00000006266 None Not determined 1
stat1b STAT1 ENSDARG00000076182 None Not determined 1
stat3 STAT3 ENSDARG00000022712 5 Not determined 7
stat4 STAT4 ENSDARG00000028731 2 Not determined 19
stat5.1 STAT5B ENSDARG00000019392 2 Not determined 1
stat5.1 STAT5A ENSDARG00000019392 2 Not determined 1
stat5.2 STAT5A ENSDARG00000055588 None Not determined 1
stat5.2 STAT5B ENSDARG00000055588 None Not determined 1
sult1st1 SULT1A1 ENSDARG00000028275 None Not determined 2
sult1st1 SULT1A2 ENSDARG00000028275 None Not determined 3
sult1st2 SULT1A1 ENSDARG00000041540 1 Not determined 2
sult1st2 SULT1A2 ENSDARG00000041540 1 Not determined 3
sult1st3 SULT1A1 ENSDARG00000018361 3 1 phenotype 2
sult1st3 SULT1A2 ENSDARG00000018361 3 1 phenotype 3
sult1st4 SULT1A1 ENSDARG00000003181 1 Not determined 2
sult1st4 SULT1A2 ENSDARG00000003181 1 Not determined 3
sult1st5 SULT1A1 ENSDARG00000003475 None Not determined 2
sult1st5 SULT1A2 ENSDARG00000003475 None Not determined 3
sult1st6 SULT1A1 ENSDARG00000006811 None Not determined 2
sult1st6 SULT1A2 ENSDARG00000006811 None Not determined 3
tab1 TAB1 ENSDARG00000036613 None Not determined 2
tagap TAGAP ENSDARG00000043475 5 Not determined 7
tec TEC ENSDARG00000086680 3 Not determined 1
tmbim1 TMBIM1 ENSDARG00000058323 None Not determined 1
tnc TNC ENSDARG00000021948 7 2 normal 2
tnfrsf18 TNFRSF18 ENSDARG00000076800 None Not determined 1
TNFRSF4 (3 of 3) TNFRSF4 ENSDARG00000090728 None Not determined 1
TNFRSF4 (1 of 3) TNFRSF4 ENSDARG00000086534 None Not determined 1
tnfrsf9a TNFRSF4 ENSDARG00000060498 None Not determined 1
tnip1 TNIP1 ENSDARG00000015653 2 Not determined 6
tnni1al TNNI2 ENSDARG00000036671 1 Not determined 1
tnni2a.1 TNNI2 ENSDARG00000045592 None Not determined 1
tnni2a.2 TNNI2 ENSDARG00000005841 None Not determined 1
tnni2a.3 TNNI2 ENSDARG00000013752 None Not determined 1
tnni2a.4 TNNI2 ENSDARG00000029069 3 1 phenotype 1
tnni2b.1 TNNI2 ENSDARG00000035958 1 Not determined 1
tnni2b.2 TNNI2 ENSDARG00000029995 2 Not determined 1
tnpo3 TNPO3 ENSDARG00000045680 4 Not determined 7
TRAF3IP2 TRAF3IP2 ENSDARG00000087515 None Not determined 4
trib1 TRIB1 ENSDARG00000076142 1 Not determined 12
tspan14 TSPAN14 ENSDARG00000055938 1 Not determined 1
tspan33 TSPAN33 ENSDARG00000004497 2 Not determined 1
tubd1 TUBD1 ENSDARG00000058219 2 Not determined 2
TXK TXK ENSDARG00000015068 2 Not determined 1
TYK2 TYK2 ENSDARG00000020326 3 Not determined 6
ube2l3a UBE2L3 ENSDARG00000019188 None Not determined 8
ube2l3b UBE2L3 ENSDARG00000027141 None Not determined 8
ubin UBQLN4 ENSDARG00000052975 3 Not determined 1
usf1 USF1 ENSDARG00000041689 3 Not determined 1
usf1l USF1 ENSDARG00000014463 1 Not determined 1
usp4 USP4 ENSDARG00000014770 1 Not determined 1
uts1 UCN ENSDARG00000014927 None Not determined 1
VDR (1 of 2) VDR ENSDARG00000043059 None Not determined 1
vdrb VDR ENSDARG00000070721 1 Not determined 1
wu:fb12c06 LITAF ENSDARG00000087093 None Not determined 4
wu:fd58b11 HLA-DRB1 ENSDARG00000054921 None Not determined 35
wu:fd58b11 HLA-DQB1 ENSDARG00000054921 None Not determined 24
wwp1 SMURF1 ENSDARG00000016086 6 Not determined 2
ydjc YDJC ENSDARG00000062655 1 Not determined 4
yrk FYN ENSDARG00000004378 1 Not determined 1
zfp36l1a ZFP36L1 ENSDARG00000016154 None Not determined 4
zfp36l1b ZFP36L1 ENSDARG00000021443 None Not determined 4
zgc:101560 TNNI2 ENSDARG00000028343 None Not determined 1
zgc:101560 TNNI2 ENSDARG00000079617 None Not determined 1
zgc:101654 ORMDL3 ENSDARG00000025555 1 Not determined 14
zgc:110843 CISD1 ENSDARG00000073845 None Not determined 1
zgc:112054 CREM ENSDARG00000033660 None Not determined 2
zgc:112242 TNNI2 ENSDARG00000070827 1 Not determined 1
zgc:113138 TRPT1 ENSDARG00000037628 None Not determined 2
zgc:113223 TSPAN33 ENSDARG00000042967 None Not determined 1
zgc:113223 TSPAN33 ENSDARG00000090253 None Not determined 1
zgc:113411 SP140 ENSDARG00000038133 None Not determined 4
zgc:123107 HLA-DRA ENSDARG00000020286 None Not determined 21
zgc:123107 HLA-DQA1 ENSDARG00000020286 None Not determined 27
zgc:123242 TTYH3 ENSDARG00000007678 1 Not determined 1
zgc:136614 MICB ENSDARG00000069471 None Not determined 7
zgc:153067 HLA-DRB1 ENSDARG00000056330 1 Not determined 35
zgc:153067 HLA-DQB1 ENSDARG00000056330 1 Not determined 24
zgc:153206 UQCC ENSDARG00000068176 None Not determined 6
zgc:153219 ITLN1 ENSDARG00000054054 3 Not determined 3
zgc:153444 C10orf58 ENSDARG00000087059 1 Not determined 1
zgc:153631 TNFRSF4 ENSDARG00000068993 1 Not determined 1
zgc:153759 TNFRSF4 ENSDARG00000068969 None Not determined 1
zgc:154089 DCLRE1B ENSDARG00000068833 None Not determined 1
zgc:158331 IPMK ENSDARG00000029291 2 Not determined 2
zgc:158419 RABEP2 ENSDARG00000061213 3 Not determined 1
zgc:158862 TNFRSF4 ENSDARG00000068963 None Not determined 1
zgc:165612 INPP5E ENSDARG00000078655 None Not determined 2
zgc:171579 GPR65 ENSDARG00000039234 None Not determined 3
zgc:171586 GPR35 ENSDARG00000074633 None Not determined 3
zgc:172163 ERAP2 ENSDARG00000075029 None Not determined 2
zgc:172183 C11orf9 ENSDARG00000078676 1 Not determined 3
zgc:174006 HSPA6 ENSDARG00000029688 None Not determined 2
zgc:174006 HSPA6 ENSDARG00000092362 None Not determined 2
zgc:195317 ZNF831 ENSDARG00000074906 7 Not determined 3
zgc:56194 ERAP1 ENSDARG00000021859 None Not determined 7
zgc:63663 HSPA6 ENSDARG00000012381 1 Not determined 2
zgc:64115 MICB ENSDARG00000036588 2 Not determined 7
zgc:66103 LNPEP ENSDARG00000014403 None Not determined 1
zgc:73311 C10orf58 ENSDARG00000057378 1 Not determined 1
zgc:77060 NFIL3 ENSDARG00000087188 1 Not determined 1
zgc:77799 TAGAP ENSDARG00000002353 None Not determined 7
zgc:77875 MTMR3 ENSDARG00000058305 2 Not determined 6
zgc:92046 IP6K2 ENSDARG00000019613 None Not determined 1
zgc:92915 LOH12CR1 ENSDARG00000077830 None Not determined 1
zgpat ZGPAT ENSDARG00000027403 1 Not determined 2
ZGPAT (2 of 2) ZGPAT ENSDARG00000088134 None Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • ADAM30
  • AHSA2
  • APOBEC3G
  • C2orf74
  • CCDC116
  • CCDC88B
  • CD244
  • CD40
  • CD5
  • CNTF
  • CSF2
  • CTSW
  • CXCL1
  • CXCL2
  • CXCL3
  • CXCL5
  • CXCL6
  • DAP
  • FADS1
  • FAIM3
  • FCGR2A
  • FCGR2B
  • FCGR3A
  • FCGR3B
  • FCRLA
  • FUT2
  • GSDMA
  • GSDMB
  • HLA-C
  • ICAM1
  • ICOSLG
  • IFNAR2
  • IFNG
  • IKZF3
  • IL13
  • IL15RA
  • IL18R1
  • IL18RAP
  • IL1R2
  • IL2
  • IL21
  • IL22
  • IL23R
  • IL26
  • IL27
  • IL2RA
  • IL3
  • IL31RA
  • IL4
  • IL5
  • IZUMO1
  • JRKL
  • KIR2DL1
  • LACC1
  • LGALS9
  • LIF
  • LILRB4
  • LIME1
  • LSP1
  • NFKB1
  • NLRP2
  • NLRP7
  • NXPE1
  • NXPE4
  • OSM
  • PF4
  • PF4V1
  • PROCR
  • PSORS1C1
  • PTGDR2
  • RASGRP1
  • RIMBP3
  • RMI2
  • SLAMF1
  • SLAMF7
  • SNX32
  • TMEM50B
  • TNFRSF14
  • TNFSF15
  • TNFSF18
  • TNFSF8
  • UCN2
  • ZFP90
  • ZNF300P1
  • ZPBP
  • ZPBP2
* quick link - http://q.sanger.ac.uk/tht9235a