GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study for circulating levels of PAI-1 provides novel insights into its regulation.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ache ACHE ENSDARG00000031796 None Not determined 2
arntl1a ARNTL ENSDARG00000006791 1 Not determined 3
arntl1b ARNTL ENSDARG00000035732 1 Normal 3
ephb4a EPHB4 ENSDARG00000040346 3 Not determined 1
ephb4b EPHB4 ENSDARG00000027112 None Not determined 1
LOC100334697 ACHE ENSDARG00000053709 None Not determined 2
LOC792697 TRIP6 ENSDARG00000069331 3 Not determined 1
pparg PPARG ENSDARG00000031848 2 2 normal 8
serpine1 SERPINE1 ENSDARG00000056795 1 Not determined 1
si:ch211-71n6.4 ACHE ENSDARG00000088003 None Not determined 2
si:dkey-26c10.6 EPHB4 ENSDARG00000057729 None Not determined 1
si:dkey-30c15.17 ACHE ENSDARG00000058492 1 Normal 2
slc12a9 SLC12A9 ENSDARG00000060366 2 Not determined 3
srrt SRRT ENSDARG00000017762 3 Not determined 1
zgc:153039 SLC12A9 ENSDARG00000060524 None Not determined 3
zgc:163003 UFSP1 ENSDARG00000061610 None Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • MUC3
* quick link - http://q.sanger.ac.uk/k9yhtw8x