GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of seasonal pattern mania identifies NF1A as a possible susceptibility gene for bipolar disorder.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
auts2 AUTS2 ENSDARG00000056427 2 Not determined 5
LOC100150849 AUTS2 ENSDARG00000020946 1 Not determined 5
pgm1 PGM5 ENSDARG00000013561 2 Not determined 1
pgm5 PGM5 ENSDARG00000060745 2 Not determined 1
SERINC3 SERINC3 ENSDARG00000086133 None Not determined 2
zgc:162634 PIGY ENSDARG00000045773 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • NF1A
  • NF1A
  • NF1A
  • NF1A
  • NF1A
  • TTC39B
* quick link - http://q.sanger.ac.uk/a7c98x27