GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

The genetic architecture of economic and political preferences.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
A5PLH8_DANRE AKAP6 ENSDARG00000077295 3 Not determined 3
A9JTG6_DANRE CADPS ENSDARG00000070567 1 Not determined 2
ASCC3 (2 of 2) ASCC3 ENSDARG00000090561 None Not determined 1
ASCC3 (1 of 2) ASCC3 ENSDARG00000078863 3 Not determined 1
ASTN2 (3 of 3) ASTN2 ENSDARG00000090831 None Not determined 9
ASTN2 (2 of 3) ASTN2 ENSDARG00000086640 None Not determined 9
ASTN2 (1 of 3) ASTN2 ENSDARG00000089410 1 Not determined 9
CADPS (1 of 2) CADPS ENSDARG00000043661 3 Not determined 2
dcbld1 DCBLD1 ENSDARG00000015907 3 Not determined 4
dlgap1 DLGAP1 ENSDARG00000014280 2 Not determined 4
ehmt2 EHMT2 ENSDARG00000077703 None Not determined 2
fbxl7 FBXL7 ENSDARG00000077878 2 Not determined 3
LOC100001249 SLC22A9 ENSDARG00000054690 None Not determined 1
LOC100005691 DCBLD1 ENSDARG00000087892 None Not determined 4
LOC100006328 SLC13A5 ENSDARG00000039999 2 Not determined 1
neto1 NETO1 ENSDARG00000068483 None Not determined 2
neto1l NETO1 ENSDARG00000071596 2 Not determined 2
nxn NXN ENSDARG00000033978 1 Not determined 2
PCM1 PCM1 ENSDARG00000062198 4 Normal 1
PDE4B (2 of 3) PDE4B ENSDARG00000087449 None Not determined 3
PDE4B (1 of 3) PDE4B ENSDARG00000032868 None Not determined 3
pde4bb PDE4B ENSDARG00000074233 1 Not determined 3
plxna4 PLXNA4 ENSDARG00000019328 2 Not determined 1
rab30 RAB30 ENSDARG00000037884 None Not determined 2
rgs6 RGS6 ENSDARG00000015627 2 Not determined 4
rpp30 RPP30 ENSDARG00000027428 4 Not determined 1
si:ch211-205h19.1 ACOXL ENSDARG00000020149 2 Not determined 6
si:ch211-221p4.4 SLC13A5 ENSDARG00000077691 1 Not determined 1
si:ch211-248a16.1 DLGAP1 ENSDARG00000037415 1 Not determined 4
si:dkey-100g3.2 LRRC58 ENSDARG00000076773 1 Not determined 2
si:dkey-119m7.4 SLC22A9 ENSDARG00000071049 4 Normal 1
si:dkey-32o22.4 LRRC58 ENSDARG00000063509 None Not determined 2
THAP2 THAP2 ENSDARG00000055690 None Not determined 1
zgc:158346 FBXL7 ENSDARG00000062251 None Not determined 3
zgc:85611 ACBD4 ENSDARG00000027070 None Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • AKR1C1
  • CD200R1
  • EDG7
  • LOC388910
  • RICH2
  • SOHLH2
* quick link - http://q.sanger.ac.uk/kniabrw7