GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
adipoql ADIPOQ ENSDARG00000056411 2 Not determined 7
adipoql2 ADIPOQ ENSDARG00000062228 None Not determined 7
arl15a ARL15 ENSDARG00000076040 None Not determined 3
arl15b ARL15 ENSDARG00000057995 1 Not determined 3
cdh5 CDH13 ENSDARG00000075549 5 Not determined 15
gnl3 GNL3 ENSDARG00000006219 None Not determined 4
LOC559281 IRS1 ENSDARG00000054087 1 Not determined 7
NP_001156764.1 GPR109A ENSDARG00000086066 None Not determined 1
NP_001156767.1 GPR109A ENSDARG00000079958 None Not determined 1
pepd PEPD ENSDARG00000018020 2 Not determined 3
si:ch211-106a19.2 ATP6V0A2 ENSDARG00000035565 None Not determined 1
si:ch211-122a20.1 CDH13 ENSDARG00000014215 1 Not determined 15
si:ch211-199i18.4 ATP6V0A2 ENSDARG00000035538 2 Not determined 1
si:dkey-48h7.2 PDE3A ENSDARG00000004227 1 Not determined 7
si:dkeyp-86b9.1 DNAH10 ENSDARG00000061486 4 Not determined 2
trib1 TRIB1 ENSDARG00000076142 1 Not determined 12
tsc22d2 TSC22D2 ENSDARG00000041839 2 Not determined 1
vegfaa VEGFA ENSDARG00000045971 None Not determined 8
vegfab VEGFA ENSDARG00000034700 1 Not determined 8
zgc:110848 LYPLAL1 ENSDARG00000088764 None Not determined 6
zgc:56306 IRS1 ENSDARG00000037099 1 Not determined 7

The following reported genes could not be linked automatically to a zebrafish gene:

  • CMIP
  • CMIP
* quick link - http://q.sanger.ac.uk/uawna4bv