GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Meta-analysis identifies common variants associated with body mass index in east Asians.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
adcy3 ADCY3 ENSDARG00000017437 2 Not determined 6
ADCY3 (1 of 2) ADCY3 ENSDARG00000077145 None Not determined 6
cdkal1 CDKAL1 ENSDARG00000022122 None Not determined 23
dnajc27 DNAJC27 ENSDARG00000070916 1 Not determined 4
GIPR GIPR ENSDARG00000025478 2 Not determined 5
map2k5 MAP2K5 ENSDARG00000011851 6 Not determined 4
pax6b PAX6 ENSDARG00000045936 6 1 phenotype 1
PAX6_DANRE PAX6 ENSDARG00000045045 None Not determined 1
pcsk1 PCSK1 ENSDARG00000002600 3 Normal 3
si:ch211-191j22.6 QPCTL ENSDARG00000062293 None Not determined 3
si:dkey-149j18.2 QPCTL ENSDARG00000061691 None Not determined 3
zgc:193533 PAX6 ENSDARG00000053364 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • GP2
* quick link - http://q.sanger.ac.uk/ohusau2c