GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genetic predictors of fibrin D-dimer levels in healthy adults.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
abca4a ABCA4 ENSDARG00000057169 1 Not determined 2
ARHGAP29 (1 of 2) ARHGAP29 ENSDARG00000026329 1 Not determined 1
arhgap29b ARHGAP29 ENSDARG00000017748 5 Not determined 1
C7U137_DANRE PTPRJ ENSDARG00000091539 1 Not determined 2
cdh5 CDH13 ENSDARG00000075549 5 Not determined 15
f3a F3 ENSDARG00000021013 None Not determined 3
f3b F3 ENSDARG00000005673 None Not determined 3
f5 F5 ENSDARG00000055705 9 Not determined 7
fga FGA ENSDARG00000020741 2 Normal 4
fgg FGG ENSDARG00000037281 3 Not determined 4
LOC100007474 FGA ENSDARG00000089667 None Not determined 4
LOC100007488 FGA ENSDARG00000090557 None Not determined 4
LOC100148227 FGA ENSDARG00000095746 None Not determined 4
LOC566119 FGA ENSDARG00000094845 1 Not determined 4
lrp4 LRP4 ENSDARG00000090535 2 Not determined 3
mfap4 FGA ENSDARG00000090783 1 Not determined 4
nme7 NME7 ENSDARG00000056193 None Not determined 3
PTPRJ (3 of 3) PTPRJ ENSDARG00000086511 2 Not determined 2
ptprja PTPRJ ENSDARG00000033042 7 Not determined 2
si:ch211-122a20.1 CDH13 ENSDARG00000014215 1 Not determined 15
si:ch211-195i6.4 ABCA4 ENSDARG00000062661 7 Not determined 2
wu:fj11g02 FGA ENSDARG00000038681 None Not determined 4
zgc:171687 FGA ENSDARG00000038682 None Not determined 4
zgc:173915 FGA ENSDARG00000088745 1 Not determined 4
zgc:92873 C11orf49 ENSDARG00000090616 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • ABO
  • OR4C45
  • PROCR
  • RGNEF
* quick link - http://q.sanger.ac.uk/usxjipf4