GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
adamts9 ADAMTS9 ENSDARG00000077778 5 Not determined 5
BTNL2 BTNL2 ENSDARG00000093039 1 Not determined 18
cpeb4 CPEB4 ENSDARG00000056691 None Not determined 4
CPEB4 (1 of 3) CPEB4 ENSDARG00000060495 None Not determined 4
GRB14 GRB14 ENSDARG00000068280 None Not determined 5
hoxc13a HOXC13 ENSDARG00000070353 None Not determined 2
hoxc13b HOXC13 ENSDARG00000090023 None Not determined 2
itpr2 ITPR2 ENSDARG00000011909 6 Normal 3
LOC100333151 CPEB4 ENSDARG00000074474 1 Not determined 4
LY86 LY86 ENSDARG00000090649 None Not determined 2
nfe2l3 NFE2L3 ENSDARG00000019810 1 Not determined 2
pigc PIGC ENSDARG00000009113 1 Not determined 1
si:ch1073-288d12.1 NISCH ENSDARG00000094828 None Not determined 2
si:ch211-103f16.1 NISCH ENSDARG00000043077 None Not determined 2
si:ch211-159p3.1 ZEB1 ENSDARG00000016788 2 Not determined 1
si:dkey-19f21.3 DNM3 ENSDARG00000032238 2 Not determined 6
si:dkeyp-7c9.1 KREMEN1 ENSDARG00000062579 2 Normal 1
si:dkeyp-7c9.3 ZNRF3 ENSDARG00000062573 2 Not determined 1
sspn SSPN ENSDARG00000041747 1 Not determined 1
stab1l STAB1 ENSDARG00000076484 7 Normal 2
tbx15 TBX15 ENSDARG00000002582 None Not determined 1
tnfaip6 STAB1 ENSDARG00000093440 1 Not determined 2
vegfaa VEGFA ENSDARG00000045971 None Not determined 8
vegfab VEGFA ENSDARG00000034700 1 Not determined 8
wars2 WARS2 ENSDARG00000011801 None Not determined 1
zeb1 ZEB1 ENSDARG00000013207 1 Not determined 1
zgc:110848 LYPLAL1 ENSDARG00000088764 None Not determined 6
zgc:162040 RSPO3 ENSDARG00000070081 1 Not determined 7
* quick link - http://q.sanger.ac.uk/kel3md1r