GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
antxr2a ANTXR2 ENSDARG00000060520 2 Not determined 2
antxr2b ANTXR2 ENSDARG00000063011 1 Not determined 2
LOC558930 B3GNT2 ENSDARG00000089094 1 Not determined 2
psmg1 PSMG1 ENSDARG00000040620 None Not determined 3
si:ch211-213b8.3 B3GNT2 ENSDARG00000052376 None Not determined 2
si:dkey-175m17.6 B3GNT2 ENSDARG00000088601 1 Not determined 2
si:dkey-24n17.6 ERAP1 ENSDARG00000013024 1 Not determined 7
zgc:113947 B3GNT2 ENSDARG00000091902 None Not determined 2
zgc:56194 ERAP1 ENSDARG00000021859 None Not determined 7

The following reported genes could not be linked automatically to a zebrafish gene:

  • IL1R2
  • IL23R
  • MHC
* quick link - http://q.sanger.ac.uk/sqpz3nad