GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
atp6v1b2 ATP6V1B2 ENSDARG00000043465 1 Not determined 1
atp6v1ba ATP6V1B2 ENSDARG00000013443 1 Not determined 1
LY86 LY86 ENSDARG00000090649 None Not determined 2
lzts2 LZTS1 ENSDARG00000074597 None Not determined 3
si:dkey-63d15.13 LZTS1 ENSDARG00000075565 1 Not determined 3
si:dkeyp-46a10.1 SLC18A1 ENSDARG00000078157 None Not determined 2
sp4 SP4 ENSDARG00000005186 None Not determined 3
wu:fj90d02 LZTS1 ENSDARG00000077207 None Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • AK294384
  • BC043421
  • GRM7
* quick link - http://q.sanger.ac.uk/84of4xaz