GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
akt3 AKT3 ENSDARG00000087205 None Not determined 2
arhgap10 ARHGAP10 ENSDARG00000078326 3 Not determined 2
B0S746_DANRE TTN ENSDARG00000000563 54 1 phenotype, 1 normal 2
ca16b PTPRG ENSDARG00000060123 3 Not determined 5
gpr133 GPR133 ENSDARG00000053344 1 Not determined 4
LOC100005846 ELMO1 ENSDARG00000055400 None Not determined 8
nos1apa NOS1AP ENSDARG00000078725 1 Not determined 10
NP_001184130.1 AKT3 ENSDARG00000063400 None Not determined 2
NP_998256.1 ELMO1 ENSDARG00000019258 3 Not determined 8
ptprga PTPRG ENSDARG00000045006 4 Not determined 5
rasgrf1 RASGRF1 ENSDARG00000073824 None Not determined 3
si:ch211-220f12.1 FRMD4A ENSDARG00000042249 2 Normal 2
si:dkey-34e4.1 NOS1AP ENSDARG00000022085 1 Not determined 10
si:dkey-48h7.2 PDE3A ENSDARG00000004227 1 Not determined 7
ttna TTN ENSDARG00000028213 59 2 phenotypes 2
ttnb TTN ENSDARG00000091908 14 1 phenotype 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • LOC100132805
  • TCL6
* quick link - http://q.sanger.ac.uk/s1paaf9d