GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide scan identifies variation in MLXIPL associated with plasma triglycerides.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
apoa1 APOA1 ENSDARG00000012076 1 Not determined 13
apoa4 APOA1 ENSDARG00000040298 1 Not determined 13
LOC100331214 LPL ENSDARG00000034667 None Not determined 21
lpl LPL ENSDARG00000087697 1 Not determined 21
LPL (1 of 2) LPL ENSDARG00000091659 None Not determined 21
si:ch1073-189o9.1 MLXIPL ENSDARG00000089107 None Not determined 13
si:dkey-7f3.15 APOA1 ENSDARG00000094929 None Not determined 13
si:dkeyp-46a10.1 SLC18A1 ENSDARG00000078157 None Not determined 2
zgc:112992 APOA1 ENSDARG00000086281 None Not determined 13
zgc:194131 APOA1 ENSDARG00000020866 2 Not determined 13

The following reported genes could not be linked automatically to a zebrafish gene:

  • C8orf35
  • KIAA0999
  • LOC440069
  • LOC645044
  • MGC13125
* quick link - http://q.sanger.ac.uk/yepamnx7