BTNL2

Ensembl ID:
ENSDARG00000093039
Description:
butyrophilin-like 2 (MHC class II associated) [Source:HGNC Symbol;Acc:1142]
Human Orthologues:
BTN1A1, BTN2A1, BTN2A2, BTN3A1, BTN3A2, BTN3A3, BTNL2, RP5-915N17.9
Human Descriptions:
butyrophilin, subfamily 1, member A1 [Source:HGNC Symbol;Acc:1135]
butyrophilin, subfamily 2, member A1 [Source:HGNC Symbol;Acc:1136]
butyrophilin, subfamily 2, member A2 [Source:HGNC Symbol;Acc:1137]
butyrophilin, subfamily 3, member A1 [Source:HGNC Symbol;Acc:1138]
butyrophilin, subfamily 3, member A2 [Source:HGNC Symbol;Acc:1139]
butyrophilin, subfamily 3, member A3 [Source:HGNC Symbol;Acc:1140]
butyrophilin-like 2 (MHC class II associated) [Source:HGNC Symbol;Acc:1142]
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A8MVZ5]
Mouse Orthologues:
Btn1a1, Btn2a2, Btn3a3, Btnl2, Btnl3, Btnl5, Btnl6, Btnl7, Butr1, Skint1, Skint2, Skint3, Skint4, Skint5, Skint6, Skint7, Skint8
Mouse Descriptions:
butyrophilin related 1 Gene [Source:MGI Symbol;Acc:MGI:2182073]
butyrophilin, subfamily 1, member A1 Gene [Source:MGI Symbol;Acc:MGI:103118]
butyrophilin, subfamily 2, member A2 Gene [Source:MGI Symbol;Acc:MGI:3606486]
butyrophilin, subfamily 3, member A3 Gene [Source:MGI Symbol;Acc:MGI:1932036]
butyrophilin-like 2 Gene [Source:MGI Symbol;Acc:MGI:1859549]
butyrophilin-like 3 Gene [Source:MGI Symbol;Acc:MGI:1932027]
butyrophilin-like 5 Gene [Source:MGI Symbol;Acc:MGI:1932037]
butyrophilin-like 6 Gene [Source:MGI Symbol;Acc:MGI:1932038]
butyrophilin-like 7 Gene [Source:MGI Symbol;Acc:MGI:2388054]
selection and upkeep of intraepithelial T cells 1 Gene [Source:MGI Symbol;Acc:MGI:3649627]
selection and upkeep of intraepithelial T cells 2 Gene [Source:MGI Symbol;Acc:MGI:3649629]
selection and upkeep of intraepithelial T cells 3 Gene [Source:MGI Symbol;Acc:MGI:3045331]
selection and upkeep of intraepithelial T cells 4 Gene [Source:MGI Symbol;Acc:MGI:2444425]
selection and upkeep of intraepithelial T cells 5 Gene [Source:MGI Symbol;Acc:MGI:3650151]
selection and upkeep of intraepithelial T cells 6 Gene [Source:MGI Symbol;Acc:MGI:3649262]
selection and upkeep of intraepithelial T cells 7 Gene [Source:MGI Symbol;Acc:MGI:3041190]
selection and upkeep of intraepithelial T cells 8 Gene [Source:MGI Symbol;Acc:MGI:3651523]

Alleles

There is 1 allele of this gene:

Allele name Consequence Status Availability Estimate
sa16505 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa16505
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000141885 Nonsense 314 430 5 6
Genomic Location:
Chromosome 7 (position 844000)
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TGGAGATGTGTCTCTGCAGCTGGAGAMGATCAYCATTCAGGATGAAGCTW[T/A]ATTTCACTGCTAYGTCAGTGGAGAYAATGGATATGACAGTGMASAGCTGG
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

  • Anti-cyclic Citrullinated Peptide Antibody: Genome-wide association study of determinants of anti-cyclic citrullinated peptide antibody titer in adults with rheumatoid arthritis. (View Study)
  • Asthma: Genome-wide association studies of asthma in population-based cohorts confirm known and suggested loci and identify an additional association near HLA. (View Study)
  • Asthma: Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population. (View Study)
  • Coronary heart disease: Genome-wide association study in Han Chinese identifies four new susceptibility loci for coronary artery disease. (View Study)
  • Hepatitis C induced liver cirrhosis: A genome-wide association study of HCV-induced liver cirrhosis in the Japanese population identifies novel susceptibility loci at the MHC region. (View Study)
  • HIV-1 control: Common genetic variation and the control of HIV-1 in humans. (View Study)
  • Iron status biomarkers: Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels. (View Study)
  • Knee osteoarthritis: New sequence variants in HLA class II/III region associated with susceptibility to knee osteoarthritis identified by genome-wide association study. (View Study)
  • Lung adenocarcinoma: A genome-wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population. (View Study)
  • Multiple sclerosis (OCB status): Oligoclonal band status in Scandinavian multiple sclerosis patients is associated with specific genetic risk alleles. (View Study)
  • Primary biliary cirrhosis: Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants. (View Study)
  • Sarcoidosis: Genome-wide association analysis reveals 12q13.3-q14.1 as new risk locus for sarcoidosis. (View Study)
  • Schizophrenia: Common variants on chromosome 6p22.1 are associated with schizophrenia. (View Study)
  • Ulcerative colitis: A genome-wide association study identifies three new susceptibility loci for ulcerative colitis in the Japanese population. (View Study)
  • Ulcerative colitis: Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. (View Study)
  • Ulcerative colitis: Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility. (View Study)
  • Ulcerative colitis: Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study. (View Study)
  • Vitiligo: Genome-wide analysis identifies a quantitative trait locus in the MHC class II region associated with generalized vitiligo age of onset. (View Study)
  • Vitiligo: Variant of TYR and autoimmunity susceptibility loci in generalized vitiligo. (View Study)
  • Waist-hip ratio: Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. (View Study)

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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* quick link - http://q.sanger.ac.uk/ws8p30ys