ahctf1

Ensembl ID:
ENSDARG00000077530
ZFIN ID:
ZDB-GENE-070521-2
Description:
Ahctf1 protein [Source:UniProtKB/TrEMBL;Acc:A5D6S7]
Human Orthologue:
AHCTF1
Human Description:
AT hook containing transcription factor 1 [Source:HGNC Symbol;Acc:24618]
Mouse Orthologue:
Ahctf1
Mouse Description:
AT hook containing transcription factor 1 Gene [Source:MGI Symbol;Acc:MGI:1915033]

Alleles

There are 5 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa23014 Nonsense Available for shipment Available now
sa9115 Essential Splice Site Mutation detected in F1 DNA During 2018
sa664 Nonsense F2 line generated During 2018
sa32129 Nonsense Available for shipment Available now
sa28817 Nonsense Mutation detected in F1 DNA During 2018

Mutation Details

Allele Name:
sa23014
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115321 Nonsense 416 2527 8 35
Genomic Location (Zv9):
Chromosome 17 (position 12100512)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 12083034
GRCz11 17 12237100
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGGTGTATTTGACATAAACAGATGGTACCACGCTCAGATGCCAGATTCAT[T/A]GAGGTCAGTATGCTATTAGTAATGCACTCAGATTTGATGGAAGGACATGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9115
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
T > G
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115321 Essential Splice Site 417 2527 8 35
Genomic Location (Zv9):
Chromosome 17 (position 12100507)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 12083029
GRCz11 17 12237095
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TATTTGACATAAACAGATGGTACCACGCTCAGATGCCAGATTCATTGAGG[T/G]CAGTATGCTATTAGTAATGCACTCAGATTTGATGGAAGGAYATGTTGCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa664
Current Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115321 Nonsense 468 2527 9 35
Genomic Location (Zv9):
Chromosome 17 (position 12100250)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 12082772
GRCz11 17 12236838
KASP Assay ID:
554-0572.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
ATGAGCGCAGTCTAAGCAGAGGTCTCCCCTATACATGTCCTCCACCAGAA[C/T]AGTTCTTCAATCCCACCACATACAACTTTGGCAAGACCTTTTCTTTATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32129
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115321 Nonsense 1030 2527 23 35
Genomic Location (Zv9):
Chromosome 17 (position 12092877)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 12075399
GRCz11 17 12229465
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGTTAGCCATCGAACGAGCAAAACCGTACCAACACCCTACTTTGATTCAC[A/T]GAGGTAATGAAAGCTGTCATAAGCACTGGAAACTATTCGTAAAAAGTGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28817
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
A > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000115321 Nonsense 1303 2527 28 35
Genomic Location (Zv9):
Chromosome 17 (position 12091165)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 12073687
GRCz11 17 12227753
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TGGGAGAGCAGGAGAATCCTGACGTAGAATCTGAGACTGGATCCTCTATT[A/T]AAGAAATCCCCTTAGCAGAGTCCACAAAAGTGCTTCCCACTCTCGTGCGA
Associated Phenotype:
Not determined

Register

If you would like to be informed when the status of this gene changes (for example, a new allele is generated or an allele is made available for distribution) then please enter your details below:

Short-link