TRIM65 (77 of 82)

Ensembl ID:
ENSDARG00000076019
Description:
tripartite motif-containing 65 [Source:HGNC Symbol;Acc:27316]
Human Orthologue:
TRIM65
Human Description:
tripartite motif-containing 65 [Source:HGNC Symbol;Acc:27316]
Mouse Orthologue:
Trim65
Mouse Description:
tripartite motif-containing 65 Gene [Source:MGI Symbol;Acc:MGI:2442815]

Alleles

There are 5 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa42294 Nonsense Mutation detected in F1 DNA During 2016
sa38971 Nonsense Mutation detected in F1 DNA During 2016
sa2717 Essential Splice Site F2 line generated During 2016
sa13209 Nonsense Available for shipment Available now
sa3855 Essential Splice Site Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa42294
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056982 Nonsense 110 380 1 6
Genomic Location:
Chromosome 13 (position 46758599)
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TGTTTGTAAAGGAAGAAAACTCAAAGCCGTCAGGTCTTGTCTGGTGTGTT[T/A]GGCGTCATTCTGTCAAACTCACCTTCAGCCTCATTGTGACTCTGAAGCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38971
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056982 Nonsense 167 380 1 6
Genomic Location:
Chromosome 13 (position 46758428)
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TCTGGAGATTTACTGCTACGAGGACAAGAGGTGTATTTGTGTGCTTTGTT[T/A]GGGTCAACACAGAGGACATAAGACTGTATCAGCCGCAAATGAAATGCCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2717
Current Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
A > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056982 Essential Splice Site 219 380 3 6
Genomic Location:
Chromosome 13 (position 46754742)
KASP Assay ID:
554-3377.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
ATTCAATTTGTAATTTATTAGGCTAATAACCTATGTTRCTGTGTCCTGAC[A/T]GAGCTCTGCACAGGCAGCAGTGGAGCACAGCGACAGGATCTTCACTGARC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13209
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056982 Nonsense 243 380 3 6
Genomic Location:
Chromosome 13 (position 46754668)
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
AGCACAGCGACAGGATCTTCACTGARCTCATTAGATCCCTTACCAAAAAA[C/T]GAACTGAAGTGAGAGGAGAGATCAGAGCTCAGGAGAAAAGGGAGACTCAR
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa3855
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
A > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056982 Essential Splice Site 297 380 4 6
Genomic Location:
Chromosome 13 (position 46754421)
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TTATTAAGTGCTCACTATTGACTCTATGAAGTCTTTTCCTCTCAAATTGC[A/T]GAATTACTCCTCTCACTCTACCAAAATACCATATACTTTACCAAAGAAAG
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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