gnpat

Ensembl ID:
ENSDARG00000074401
ZFIN ID:
ZDB-GENE-040618-4
Human Orthologue:
GNPAT
Human Description:
glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:4416]
Mouse Orthologue:
Gnpat
Mouse Description:
glyceronephosphate O-acyltransferase Gene [Source:MGI Symbol;Acc:MGI:1343460]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa3049 Essential Splice Site Available for shipment Available now
sa32272 Nonsense Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa3049
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113132 Essential Splice Site 338 671 8 16
Genomic Location (Zv9):
Chromosome 20 (position 3915083)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 3857352
KASP Assay ID:
554-2522.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
GTTTGGCAGAACGRAAAATAAACCGMTCTCAATACAACCTGCTGCCCAGG[T/C]ATGACACTGCATTCAGCCACGTTCTGCCGTAAAGGCCTTCATCATTCACA
Associated Phenotype:

Normal

Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461

Mutation Details

Allele Name:
sa32272
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113132 Nonsense 398 671 9 16
Genomic Location (Zv9):
Chromosome 20 (position 3913507)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 3855776
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
CACAACCCCGACGGCCTGGATCTGTCCTCCCTCACAGAACAGACAGACTG[G/A]CTCAGACACCTCGCACTGGCGTTTGGAGCCTTCCTGGACTGGCCTGGTAG
Associated Phenotype:
Not determined

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