LOC565621

Ensembl ID:
ENSDARG00000063663
Human Orthologue:
CLP1
Human Description:
CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc
Mouse Orthologue:
Clp1
Mouse Description:
CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) Gene [Source:MGI Symbol

Alleles

There is 1 allele of this gene:

Allele name Consequence Status Availability Estimate
sa6358 Essential Splice Site Confirmed mutation in F2 line During 2016

Mutation Details

Allele Name:
sa6358
Current Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000093232 Essential Splice Site 214 443 4 6
Genomic Location (Zv9):
Chromosome 14 (position 51248393)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 50001109
KASP Assay ID:
554-5184.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TCATTTTGGCTCCACYACTCCAGGRACAAACATCAAACTTTACAACAAGG[T/A]AATAATGACACCGRTGCACTTAAGGGAGTGTTGTTTTTACACATCAGCTT
Associated Phenotype:

This allele has been associated with this phenotype by genetic linkage analysis and may not be causal. See FAQs for more info.

Stage Entity Quality Tag
Larval:Day 4
ZFS:0000036
brain
ZFA:0000008
necrotic
PATO:0000647
abnormal
PATO:0000460
Larval:Day 4
ZFS:0000036
eye
ZFA:0000107
degenerate
PATO:0000639
abnormal
PATO:0000460
Larval:Day 4
ZFS:0000036
head
ZFA:0001114
decreased size
PATO:0000587
abnormal
PATO:0000460
Larval:Day 4
ZFS:0000036
pericardium
ZFA:0000054
edematous
PATO:0001450
abnormal
PATO:0000460
Larval:Day 4
ZFS:0000036
trunk
ZFA:0001115
curved dorsal
PATO:0001468
abnormal
PATO:0000460
Larval:Day 4
ZFS:0000036
trunk
ZFA:0001115
decreased thickness
PATO:0000592
abnormal
PATO:0000460

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