abcc13

Ensembl ID:
ENSDARG00000062519
ZFIN ID:
ZDB-GENE-050517-26
Human Orthologues:
ABCC8, ABCC9
Human Descriptions:
ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:HGNC Symbol;Acc:59]
ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:HGNC Symbol;Acc:60]
Mouse Orthologues:
Abcc8, Abcc9
Mouse Descriptions:
ATP-binding cassette, sub-family C (CFTR/MRP), member 8 Gene [Source:MGI Symbol;Acc:MGI:1352629]
ATP-binding cassette, sub-family C (CFTR/MRP), member 9 Gene [Source:MGI Symbol;Acc:MGI:1352630]

Alleles

There are 7 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa44146 Nonsense Mutation detected in F1 DNA During 2016
sa44145 Nonsense Mutation detected in F1 DNA During 2016
sa24505 Nonsense Available for shipment Available now
sa39452 Essential Splice Site Mutation detected in F1 DNA During 2016
sa10993 Essential Splice Site Available for shipment Available now
sa17159 Essential Splice Site Available for shipment Available now
sa44144 Nonsense Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa44146
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090514 Nonsense 43 1182 1 29
ENSDART00000142813   None 305 None 9
Genomic Location (Zv9):
Chromosome 24 (position 24670184)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 23917062
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ACCCTTTGCTCTGTGTTTGATCATGAGTGGGAAAAACAACAGAATAATTA[C/A]AAGGAGGTAACTTTAATGAAAACAGCACAAGCCAGAGAAATTGTGTTTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44145
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > G
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090514 Nonsense 91 1182 2 29
ENSDART00000142813   None 305 None 9
Genomic Location (Zv9):
Chromosome 24 (position 24669947)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 23916825
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ATGGAAGACATTTCATCCATCTTTAATCAAAATTGTGCTTCTGAGATTGT[C/G]ATCTGATCTTTTCAGTATTTTAGTTCCTATTACTATCAGGTATAACCACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24505
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090514 Nonsense 223 1182 4 29
ENSDART00000142813 Nonsense 18 305 1 9
Genomic Location (Zv9):
Chromosome 24 (position 24668357)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 23915235
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGTCACTCTCTATCTGGGCTTACTTTGGGCTAAACTGGGTCCTAGTGTGT[T/A]GGTGGGAGTGACATTGCTACTAGTCCTCATCCCTGTCAAGTCAGCTGTGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39452
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090514 Essential Splice Site 269 1182 5 29
ENSDART00000142813 Essential Splice Site 64 305 2 9
Genomic Location (Zv9):
Chromosome 24 (position 24668119)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 23914997
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TCAGAGAAAAGAGTGAACAGCTCATCAAGGAAATGTTGCATAAATATCAG[G/A]TTATTTTAATTCCTAATCCTTACACTTGATCCTGTCATTTATAGTTCTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10993
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090514 Essential Splice Site 402 1182 9 29
ENSDART00000142813   None 305 None 9
ENSDART00000090514 Essential Splice Site 402 1182 9 29
ENSDART00000142813   None 305 None 9
Genomic Location (Zv9):
Chromosome 24 (position 24664290)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 23911168
KASP Assay ID:
2261-8757.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CAATATATTGAAGGATGYACCAAGAAAGGGGTTTTATTTATTTGGTTAAG[T/C]GAATATGTTTGTCATTGTAAAACAGGGGCTACAGAAGAGTCTTCTGCTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17159
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090514 Essential Splice Site 402 1182 9 29
ENSDART00000142813   None 305 None 9
ENSDART00000090514 Essential Splice Site 402 1182 9 29
ENSDART00000142813   None 305 None 9
Genomic Location (Zv9):
Chromosome 24 (position 24664290)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 23911168
KASP Assay ID:
2261-8757.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CAATATATTGAAGGAWGYACCAAGAAAGGGGTTTTATTTATTTGGTTAAG[T/C]GAATATGTTTGTCATTGTAAAACAGGGGCTACAGAAGAGTCTTCTGCTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44144
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > G
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090514 Nonsense 610 1182 18 29
ENSDART00000142813   None 305 None 9
Genomic Location (Zv9):
Chromosome 24 (position 24661597)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 23908475
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AAACATGGTAAAATGAAACAATTTATTTGTAAGTGAAAAAATCCTCTACT[T/G]AAAAGCAGTTGTTTGTGTTGTTTCAGGAGTTCAGGGAAGCCTGCTGGCTG
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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