trpv4

Ensembl ID:
ENSDARG00000061941
ZFIN ID:
ZDB-GENE-030912-7
Description:
transient receptor potential cation channel subfamily V member 4 [Source:RefSeq peptide;Acc:NP_0010
Human Orthologue:
TRPV4
Human Description:
transient receptor potential cation channel, subfamily V, member 4 [Source:HGNC Symbol;Acc:18083]
Mouse Orthologue:
Trpv4
Mouse Description:
transient receptor potential cation channel, subfamily V, member 4 Gene [Source:MGI Symbol;Acc:MGI:1

Alleles

There are 3 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa1671 Nonsense Available for shipment Available now
sa15329 Nonsense Available for shipment Available now
sa26435 Essential Splice Site Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa1671
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088937 Nonsense 641 841 12 15
ENSDART00000138186 Nonsense 656 856 12 15
Genomic Location (Zv9):
Chromosome 5 (position 21583903)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 19296775
KASP Assay ID:
554-1617.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
GTGTCGCTGTTGACCATCTGCCCTGATAAGGACACGTGTAAGGAAAACTG[T/A]CCTACATATCCCGAATGTCGAGACACAAACACCTTCAGTGAATTCTTGCT
Associated Phenotype:

Normal

Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461

Mutation Details

Allele Name:
sa15329
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088937 Nonsense 764 841 13 15
ENSDART00000138186 Nonsense 779 856 13 15
Genomic Location (Zv9):
Chromosome 5 (position 21581754)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 19294626
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
AGAGATGGTYACTGTGGGCAAGGGTTTGGATGGAAAGCCAGAYAAAYGCT[G/A]GTGCTTCAGRTACAGCAACAAAATATCTGCTACATTTATGTTTATTAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa26435
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088937 Essential Splice Site 767 841 13 15
ENSDART00000138186 Essential Splice Site 782 856 13 15
Genomic Location (Zv9):
Chromosome 5 (position 21581744)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 19294616
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ACTGTGGGCAAGGGTTTGGATGGAAAGCCAGACAAACGCTGGTGCTTCAG[G/A]TACAGCAACAAAATATCTGCTACATTTATGTTTATTAATTTATTATATAT
Associated Phenotype:
Not determined

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