FYCO1 (1 of 2)

Ensembl ID:
ENSDARG00000056689
Description:
FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673]
Human Orthologue:
FYCO1
Human Description:
FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673]
Mouse Orthologue:
Fyco1
Mouse Description:
FYVE and coiled-coil domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:107277]

Alleles

There are 7 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa37778 Nonsense Available for shipment Available now
sa24397 Nonsense Available for shipment Available now
sa29994 Nonsense Mutation detected in F1 DNA During 2016
sa15873 Nonsense Available for shipment Available now
sa44041 Essential Splice Site Mutation detected in F1 DNA During 2016
sa6752 Essential Splice Site Mutation detected in F1 DNA During 2016
sa24398 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa37778
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Nonsense 543 1497 7 17
Genomic Location (Zv9):
Chromosome 23 (position 40285165)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40096000
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAAT[C/T]AGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24397
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Nonsense 573 1497 7 17
Genomic Location (Zv9):
Chromosome 23 (position 40285255)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40096090
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAG[C/T]AAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29994
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Nonsense 660 1497 7 17
Genomic Location (Zv9):
Chromosome 23 (position 40285516)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40096351
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGGCCAACATGCAGCTGGAGGAATCCGAGAGCTCAATTCGGCAAAAGGAG[C/T]AGGAGAACAAGGACCTCATGGAGGTTCAGGTCACTCTTAAATCAGCTCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15873
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Nonsense 1172 1497 11 17
Genomic Location (Zv9):
Chromosome 23 (position 40303825)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40114541
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CACAACCAGTCTTTACTCATTTYTCTTTTCAGAGATAAGGACGCTCTGTG[G/A]CAGAAGTCTGAYGCTCTAGAGTTCGAGCAGAARCTAAGAGCAGAGGAGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44041
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Essential Splice Site 1217 1497 12 17
Genomic Location (Zv9):
Chromosome 23 (position 40305760)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40116476
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TACAAATATGATTATTTGTACCTGCTTTACTTGGGTTGTGTTTTCTGGCA[G/T]GTTGTGTGGCCGTATCTTCTGCTACTATTGCAGCAACAATTACGTGATGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6752
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Essential Splice Site 1335 1497 13 17
Genomic Location (Zv9):
Chromosome 23 (position 40315715)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40126429
KASP Assay ID:
554-4701.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
GCACCACCAATGGATCACATGAGGAGGAAGGAGGACAAACCGGAGATAAG[T/A]AAGTSTGTAAACACACAAAATAATGTCATACAGTTTTATGCAAAAGTTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24398
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Essential Splice Site 1436 1497 15 17
Genomic Location (Zv9):
Chromosome 23 (position 40327175)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40108742
GRCz10 23 40137881
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TCACTGTGGTGTACAGAGAGACACTTGACACACCTGTCGAGCAGGCCAAG[G/A]TAACAAACACACACATGCAAGACATTCAGAGGGTGTTGAGTGTGTCTTAA
Associated Phenotype:
Not determined

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