rbm4.2

Ensembl ID:
ENSDARG00000055080
ZFIN ID:
ZDB-GENE-030131-3019
Description:
RNA binding motif protein 4 like [Source:RefSeq peptide;Acc:NP_955971]
Human Orthologues:
RBM4, RBM4B, RP11-658F2.1
Human Descriptions:
RNA binding motif protein 4 [Source:HGNC Symbol;Acc:9901]
RNA binding motif protein 4B [Source:HGNC Symbol;Acc:28842]
RNA-binding protein 4 isoform 1 [Source:RefSeq peptide;Acc:NP_002887]
Mouse Orthologue:
Rbm4b
Mouse Description:
RNA binding motif protein 4B Gene [Source:MGI Symbol;Acc:MGI:1913954]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa38604 Nonsense Mutation detected in F1 DNA During 2016
sa20916 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa38604
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000077395 Nonsense 260 384 3 5
ENSDART00000112169 Nonsense 260 384 3 4
ENSDART00000146368 Nonsense 260 384 2 3

The following transcripts of ENSDARG00000055080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 7 (position 23966574)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 22528326
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ACCTAACCAGGGTGCCGACCGGCTATCCTGAGCGGCCTCCTGTGTATGAA[C/T]GAGATCGCTTCGGGAGCATTGACTATTACGAGAAGTTTCGGGCTCATCCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20916
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000077395 Nonsense 282 384 3 5
ENSDART00000112169 Nonsense 282 384 3 4
ENSDART00000146368 Nonsense 282 384 2 3

The following transcripts of ENSDARG00000055080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 7 (position 23966642)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 22528394
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ATTGACTATTACGAGAAGTTTCGGGCTCATCCAGCTGCCTCTAGCTACTA[T/A]GAGGATAGGCCTCACGCCATCCCCCCTCCTCCACCTCCTCCCCCCCTCTC
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

  • Bipolar disorder: Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. (View Study)

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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