agps

Ensembl ID:
ENSDARG00000042821
ZFIN ID:
ZDB-GENE-031118-14
Description:
alkyldihydroxyacetonephosphate synthase, peroxisomal [Source:RefSeq peptide;Acc:NP_956407]
Human Orthologue:
AGPS
Human Description:
alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:327]
Mouse Orthologue:
Agps
Mouse Description:
alkylglycerone phosphate synthase Gene [Source:MGI Symbol;Acc:MGI:2443065]

Alleles

There are 7 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa21415 Nonsense Available for shipment Available now
sa13105 Nonsense Available for shipment Available now
sa38719 Essential Splice Site Mutation detected in F1 DNA During 2016
sa34543 Essential Splice Site Mutation detected in F1 DNA During 2016
sa14227 Nonsense Available for shipment Available now
sa41334 Nonsense Mutation detected in F1 DNA During 2016
sa34542 Essential Splice Site Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa21415
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062850 Nonsense 30 629 1 20
ENSDART00000143130   None 230 None 8
Genomic Location (Zv9):
Chromosome 9 (position 1629144)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1637649
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGCACAGGCTGAGGATCATCGCCGGACACTTGCAGAAGCGCACAGAAGAT[C/T]AACACACCAGTCTCTCCGCGCAAAACTGCAGAGCCGAGTCTCCCGGATCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13105
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062850 Nonsense 156 629 4 20
ENSDART00000143130   None 230 None 8
Genomic Location (Zv9):
Chromosome 9 (position 1616314)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1625000
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TGAAAGCTGCAGGTCTGCTGGCGTCTCATGATGCGGAGGATCGGGTTTTC[C/T]GAGCTCATGGTAAAACACACACACACACACACACACACACACACACACTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38719
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062850 Essential Splice Site 158 629 4 20
ENSDART00000143130   None 230 None 8
Genomic Location (Zv9):
Chromosome 9 (position 1616304)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1624990
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AGGTCTGCTGGCGTCTCATGATGCGGAGGATCGGGTTTTCCGAGCTCATG[G/T]TAAAACACACACACACACACACACACACACACACACACTTACAGTTTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34543
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062850 Essential Splice Site 208 629 6 20
ENSDART00000143130   None 230 None 8
Genomic Location (Zv9):
Chromosome 9 (position 1612183)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1620869
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ATTGTGGATCTTGCCTGCAAACACAACGTCTGCTTGATTCCCTACGGAGG[C/A]AAGTAAAGCATCAGCAAATGATGCAATCATCAGCTTTAGATGTAATTGAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14227
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062850 Nonsense 396 629 12 20
ENSDART00000143130   None 230 None 8
Genomic Location (Zv9):
Chromosome 9 (position 1598918)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1607604
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TTTTGTTTCAGAGATGTGCTCCAGCATCTATTCGGCTAATGGACAACGAG[C/T]AGTTTCAGTTCGGTGAGTTWAWTGTTATCTTCAGATCTRCAAAAGATCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41334
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062850 Nonsense 476 629 15 20
ENSDART00000143130 Nonsense 77 230 3 8
Genomic Location (Zv9):
Chromosome 9 (position 1590557)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1599610
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TGTGTGTGTAGGGGTCTGGCAGCAGGAGAGGACAACGGTCAGAGGGGCTA[C/A]ATGCTGACGTTTGTGATCGCCTATCTGCGGGTGTGTCACACCACCAACAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34542
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062850 Essential Splice Site 507 629 17 20
ENSDART00000143130 Essential Splice Site 108 230 5 8
Genomic Location (Zv9):
Chromosome 9 (position 1587873)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1596926
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GTCTGCACTTTATTTAGTATTCATCTTTTTTATTTATTCTCTCTCGTTCA[G/T]GGTGTTGGATTTGTGTCGAAATGTAAAGGAGAGGATAATAAGAGAGTGTA
Associated Phenotype:
Not determined

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