trmt11

Ensembl ID:
ENSDARG00000040033
ZFIN ID:
ZDB-GENE-040426-953
Description:
tRNA guanosine-2'-O-methyltransferase TRM11 homolog [Source:RefSeq peptide;Acc:NP_956510]
Human Orthologue:
TRMT11
Human Description:
tRNA methyltransferase 11 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21080]
Mouse Orthologue:
Trmt11
Mouse Description:
tRNA methyltransferase 11 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1920931]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa42790 Nonsense Mutation detected in F1 DNA During 2016
sa2875 Nonsense F2 line generated During 2016

Mutation Details

Allele Name:
sa42790
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102552 Nonsense 115 466 5 13
ENSDART00000125484 Nonsense 115 384 5 12

The following transcripts of ENSDARG00000040033 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 42713058)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 40096508
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TCACAGGCTCCATATCTGCAGCAAAACTCAACCTATAAGATCAATGTCTA[C/A]ACTTTTAACAAAACATTAGAATTTAAGGACAGAATCAAAAAAATCGATGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2875
Current Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102552 Nonsense 285 466 9 13
ENSDART00000125484 Nonsense 285 384 9 12

The following transcripts of ENSDARG00000040033 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 42719259)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 40102709
KASP Assay ID:
554-3319.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
GATGAGAACATTCGAGCAAACTTGCGTCAGTATGGGGCTGAAAATCTCTA[T/A]GTGGACGTCATGGTGTCTGATGCCTCCAAACTGGTTTGGAGACGAAATGC
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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