LOC100333037

Ensembl ID:
ENSDARG00000039884
Human Orthologue:
IL16
Human Description:
interleukin 16 (lymphocyte chemoattractant factor) [Source:HGNC Symbol;Acc:5980]
Mouse Orthologue:
Il16
Mouse Description:
interleukin 16 Gene [Source:MGI Symbol;Acc:MGI:1270855]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa20867 Nonsense Mutation detected in F1 DNA During 2014
sa11532 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa20867
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2014.
Mutation:
A > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058342 Nonsense 249 1521 6 22
Genomic Location:
Chromosome 7 (position 12330296)
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TTTGTGTATTTTTGCAGATGCCAATTATAAAGGTGTCAGACGATGATGTC[A/T]AAGACATTGACAATGAAGACCAGGGCTGCCAAGAAATGTCCTGCAAAAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11532
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058342 Essential Splice Site 769 1521 15 22
Genomic Location:
Chromosome 7 (position 12357615)
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TTCACCAGTTAAGGAGGAAGATTTGATGCTCTCACAAAGCAATTGCCAGG[T/C]ATGGMCNNATATWTACTCKATGAAATGATCAATTATGAAGTTTATGTCTTTK
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

  • Inattentive symptoms: Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations. (View Study)

(GWAS data comes from http://www.genome.gov/gwastudies/.)

Register

If you would like to be informed when the status of this gene changes (for example, a new allele is generated or an allele is made available for distribution) then please enter your details below:

* quick link - http://q.sanger.ac.uk/3flkn9l0