LOC798970

Ensembl ID:
ENSDARG00000038465
Human Orthologue:
STMN3
Human Description:
stathmin-like 3 [Source:HGNC Symbol;Acc:15926]
Mouse Orthologue:
Stmn3
Mouse Description:
stathmin-like 3 Gene [Source:MGI Symbol;Acc:MGI:1277137]

Alleles

There is 1 allele of this gene:

Allele name Consequence Status Availability Estimate
sa38585 Essential Splice Site Mutation detected in F1 DNA During 2017

Mutation Details

Allele Name:
sa38585
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2017.
Mutation:
C > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056134 Essential Splice Site None 181 5 6
Genomic Location (Zv9):
Chromosome 6 (position 58464930)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 58568058
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AACAGCAGAGGGTGCTCTAGGCTTGTTTTACCAGCAGACGGGGCTCTAGG[C/T]TAGTGTTAACAGCAGACTGCACTCTATGCTAGTTTTAACAGTAGATGGCA
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

  • Ulcerative colitis: Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. (View Study)

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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