GPC6 (3 of 4)

Ensembl ID:
ENSDARG00000036468
Description:
glypican 6 [Source:HGNC Symbol;Acc:4454]
Human Orthologue:
GPC6
Human Description:
glypican 6 [Source:HGNC Symbol;Acc:4454]
Mouse Orthologue:
Gpc6
Mouse Description:
glypican 6 Gene [Source:MGI Symbol;Acc:MGI:1346322]

Alleles

There is 1 allele of this gene:

Allele name Consequence Status Availability Estimate
sa8472 Nonsense Mutation detected in F1 DNA During 2017

Mutation Details

Allele Name:
sa8472
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2017.
Mutation:
A > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052984 Nonsense 352 499 9 11
Genomic Location (Zv9):
Chromosome 9 (position 55351796)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 53828267
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
AGCTGAAGCATTTCCRGTCGTTCTGGGTTTCTCTGCCGCTGGTTTTCTGT[A/T]AGGAWGAACAGATTTCAGCAGATGGACAAACTGAAGATCAGCAGTGCTGG
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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