ogfod1

Ensembl ID:
ENSDARG00000036061
ZFIN ID:
ZDB-GENE-030131-3294
Description:
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1 [Source:RefSeq peptide;Acc:
Human Orthologue:
OGFOD1
Human Description:
2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:25585]
Mouse Orthologue:
Ogfod1
Mouse Description:
2-oxoglutarate and iron-dependent oxygenase domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2442

Alleles

There are 3 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa17956 Essential Splice Site Available for shipment Available now
sa34084 Essential Splice Site Mutation detected in F1 DNA During 2016
sa10828 Splice Site, Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa17956
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > G
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052349 Essential Splice Site 285 543 7 13
ENSDART00000129699 Essential Splice Site 263 521 7 13
Genomic Location (Zv9):
Chromosome 7 (position 30440339)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 28832681
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
AYGCTACATTGAGCCCTCAGCTCCCCGAYACGCTCACATCCCCAGAGAYG[T/G]AAGTCAACTTGGCCTGACAGCACANTTTTTAGTGTGTGTCATGACCAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34084
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052349 Essential Splice Site 323 543 8 13
ENSDART00000129699 Essential Splice Site 301 521 8 13
Genomic Location (Zv9):
Chromosome 7 (position 30440543)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 28832885
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AACAGGAATTCGAGGACAGTTCAGAGATTTGCTTGCCTAGTTTCTTACAG[G/A]TTAGTCATCATTATTATCTTTTACACTGTGCTTAATGTACACACAGTAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10828
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Splice Site, Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052349 Splice Site, Nonsense 437 543 10 13
ENSDART00000129699 Splice Site, Nonsense 415 521 10 13
Genomic Location (Zv9):
Chromosome 7 (position 30443426)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 28835768
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
GCTCCAGCACTGAAGCTGATGCTTCCTCACGTGAGAACAAGAAAGACAAA[G/T]GTGAGTACATGTGTGTATGGGTGRTGTGCTTTCAGATCAGTTCTTANATT
Associated Phenotype:
Not determined

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