copeb

Ensembl ID:
ENSDARG00000029072
ZFIN ID:
ZDB-GENE-021115-9
Description:
Krueppel-like factor 6 [Source:RefSeq peptide;Acc:NP_958869]
Human Orthologue:
KLF6
Human Description:
Kruppel-like factor 6 [Source:HGNC Symbol;Acc:2235]
Mouse Orthologue:
Klf6
Mouse Description:
Kruppel-like factor 6 Gene [Source:MGI Symbol;Acc:MGI:1346318]

Alleles

There are 2 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa32473 Essential Splice Site Available for shipment Available now
sa6755 Essential Splice Site Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa32473
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033494 Essential Splice Site 35 283 2 5
ENSDART00000147849 Essential Splice Site 35 274 2 4
Genomic Location (Zv9):
Chromosome 24 (position 4224954)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 4115447
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TGAAAGGAAACCCGCATGCTAAAATTGTGTTTTTTTTCCTGTTTCGAATC[A/T]GACATGTTTGGAGCTGGAGAGATATTTGCAGAGCGAGCCTTACGTCTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6755
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
C > T
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033494 Essential Splice Site None 283 4 5
ENSDART00000147849   None 274 4 4
Genomic Location (Zv9):
Chromosome 24 (position 4221203)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 4111696
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CAGGATGATTTATTTTAAAAAANNTGTAAAACAAAAAACAAAAAACAGAG[C/T]GAGTGAATGGTGTGTTGTATGGTGCATGATGAACTCCTGGACTATACACT
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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