nkx2.7

Ensembl ID:
ENSDARG00000021232
ZFIN ID:
ZDB-GENE-990415-179
Description:
NK2 transcription factor related 7 [Source:RefSeq peptide;Acc:NP_571494]
Human Orthologue:
NKX2-3
Human Description:
NK2 transcription factor related, locus 3 (Drosophila) [Source:HGNC Symbol;Acc:7836]
Mouse Orthologue:
Nkx2-3
Mouse Description:
NK2 transcription factor related, locus 3 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:97348]

Alleles

There is 1 allele of this gene:

Allele name Consequence Status Availability Estimate
sa7159 Nonsense Confirmed mutation in F2 line During 2017

Mutation Details

Allele Name:
sa7159
Current Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2017.
Mutation:
A > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000023639 Nonsense 118 269 2 2
Genomic Location (Zv9):
Chromosome 8 (position 52509720)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 50296844
KASP Assay ID:
554-5478.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CATTTACCGACTCCAGTTACAGCRGTAAAAACGGCGAGACACTCCRGGAG[A/T]AACCGAAGCAGAGGCTGCGCAGGAAACCGCGKGTGCTTTTCTCCCAARCT
Associated Phenotype:

This allele has been associated with this phenotype by genetic linkage analysis and may not be causal. See FAQs for more info.

Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
swim bladder
ZFA:0000076
aplastic
PATO:0001483
abnormal
PATO:0000460

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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