mmp2

Ensembl ID:
ENSDARG00000017676
ZFIN ID:
ZDB-GENE-030131-9123
Description:
72 kDa type IV collagenase [Source:RefSeq peptide;Acc:NP_932333]
Human Orthologue:
MMP2
Human Description:
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) [Source:HGNC S
Mouse Orthologue:
Mmp2
Mouse Description:
matrix metallopeptidase 2 Gene [Source:MGI Symbol;Acc:MGI:97009]

Alleles

There are 3 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa34122 Nonsense Mutation detected in F1 DNA During 2016
sa1218 Nonsense Available for shipment Available now
sa21006 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa34122
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026712 Nonsense 481 657 9 13
Genomic Location (Zv9):
Chromosome 7 (position 36876403)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 35150246
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ATGTATGTAATGAAAACATCATATTTGATGCTGTAGCCCAGATCAGAGGA[G/T]AGATCTTCTTCTTTAAGGACAGGTAATACATTTCATTCATTCTTTTTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1218
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026712 Nonsense 630 657 13 13
Genomic Location (Zv9):
Chromosome 7 (position 36865663)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 35139506
KASP Assay ID:
554-1127.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TATGTGGTATTAACACGTATGAACTGTTTTTAGGTCACAGCTACTTCTTC[A/T]AAGACTCACACTATCTCAAAATGGATGACAGCACTCTGAAAATTATCAAA
Associated Phenotype:

Normal

Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461

Mutation Details

Allele Name:
sa21006
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026712 Nonsense 654 657 13 13
Genomic Location (Zv9):
Chromosome 7 (position 36865589)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 35139432
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
GATGACAGCACTCTGAAAATTATCAAAGTCGGCGAGGTCAAAAAGGACTG[G/A]CTGCGCTGCTGAACATCGACAGACCATTCAGCTCTATGCCCTTCAACACT
Associated Phenotype:
Not determined

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