FARP2

Ensembl ID:
ENSDARG00000016429
Description:
FERM, RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:16460]
Human Orthologue:
FARP2
Human Description:
FERM, RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:16460]
Mouse Orthologue:
Farp2
Mouse Description:
FERM, RhoGEF and pleckstrin domain protein 2 Gene [Source:MGI Symbol;Acc:MGI:2385126]

Alleles

There are 5 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa40695 Nonsense Mutation detected in F1 DNA During 2016
sa15550 Nonsense Available for shipment Available now
sa40696 Nonsense Mutation detected in F1 DNA During 2016
sa38550 Essential Splice Site Mutation detected in F1 DNA During 2016
sa26745 Nonsense Mutation detected in F1 DNA During 2016

Mutation Details

Allele Name:
sa40695
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000013400 Nonsense 162 1044 5 26
Genomic Location (Zv9):
Chromosome 6 (position 26704527)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 27005738
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TTGTTTTCTCTGCAGATAAAGAGGGATCTATTAGATGGCCGACTGAGCTG[T/A]ACAGAAAACACTGCTGCCCTGCTTGCCTCTCATTTGGTGCAATGTATGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15550
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000013400 Nonsense 382 1044 11 26
Genomic Location (Zv9):
Chromosome 6 (position 26713480)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 27014691
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TTWGTATTGATTATTCKATTTTTACAGGAGRAACAGTAAGATTCGCATGT[C/A]GAYGCGTTCCTTGGCTTCTGATGTGCCAAAACAGGTCAGCAGAGTTTAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40696
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000013400 Nonsense 529 1044 14 26
Genomic Location (Zv9):
Chromosome 6 (position 26724668)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 27025879
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
CATAACTCATCAAAGAGTGGTTTTAAGTCTGCTTTCTTTTTTCAGAGATA[T/A]CCAACAGACAAAGCCTACTTCATTGCAAAAGAGATTCTGACAACAGAGCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38550
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000013400 Essential Splice Site 708 1044 17 26
Genomic Location (Zv9):
Chromosome 6 (position 26727051)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 27028262
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TCTGTGTAAACATTATTCACCCCAGCACAGAGACTACGATGACTGCAAAG[G/A]TAGACCTTATTCACATAAATATCACATTTTTTTGTTCTGAAAATCTGCGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa26745
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2016.
Mutation:
G > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000013400 Nonsense 948 1044 24 26
Genomic Location (Zv9):
Chromosome 6 (position 26741246)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 27042457
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
TGGTTATCTTCTGAGGAAGTTCAAGAACAGCAACGGCTGGCAGAAACTAT[G/A]GGTTGTCTTCACCAACTTCTGCCTGTTCTTCTATAAGACGCACCAGGTAC
Associated Phenotype:
Not determined

GWAS

This gene's human homologue has been identified in the following GWAS studies:

(GWAS data comes from http://www.genome.gov/gwastudies/.)

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