trim33

Ensembl ID:
ENSDARG00000016181
ZFIN ID:
ZDB-GENE-030131-2773
Description:
E3 ubiquitin-protein ligase TRIM33 [Source:UniProtKB/Swiss-Prot;Acc:Q6E2N3]
Human Orthologue:
TRIM33
Human Description:
tripartite motif-containing 33 [Source:HGNC Symbol;Acc:16290]
Mouse Orthologue:
Trim33
Mouse Description:
tripartite motif-containing 33 Gene [Source:MGI Symbol;Acc:MGI:2137357]

Alleles

There are 6 alleles of this gene:

Allele name Consequence Status Availability Estimate
sa1735 Essential Splice Site Available for shipment Available now
sa2432 Nonsense F2 line generated During 2018
sa27135 Nonsense Mutation detected in F1 DNA During 2018
sa27136 Nonsense Mutation detected in F1 DNA During 2018
sa15516 Nonsense Available for shipment Available now
sa16614 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa1735
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020116 Essential Splice Site 194 1176 1 20
ENSDART00000111005 Essential Splice Site 76 1058 2 21
ENSDART00000139603   None 104 None 2
Genomic Location (Zv9):
Chromosome 8 (position 11702684)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 10966440
GRCz11 8 11004145
KASP Assay ID:
554-1680.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
AAGMTCACCATGCCGGTGCAAGGCCCCCACGGACAGGACACTCGAATCGG[T/A]AAGTTCGGAAAGGGGAAGTGTGATTGGTAAATTCTGTCCCGAAGGATCCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2432
Current Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
G > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020116 Nonsense 325 1176 4 20
ENSDART00000111005 Nonsense 207 1058 5 21
ENSDART00000139603   None 104 None 2
Genomic Location (Zv9):
Chromosome 8 (position 11717960)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 10951164
GRCz11 8 10988869
KASP Assay ID:
554-2924.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
AGAYCTGYGACACTCTGACCTGCAGAGACTGCCAGCTACTTGAACACAAA[G/T]AACACAGGTCAGCCGGACAGCACTGTTTACACTTTACACACAACAANNNC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27135
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020116 Nonsense 572 1176 9 20
ENSDART00000111005 Nonsense 454 1058 10 21
ENSDART00000139603   None 104 None 2
Genomic Location (Zv9):
Chromosome 8 (position 11728810)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 10940314
GRCz11 8 10978019
KASP Assay ID:
554-6565.1 (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
ACCAACAACAACAACACCAACACCAACAACAGCAGCAGCAACAACAACAA[C/T]AACAACAACAACAGCAGCAGCAACAACAACAACAGCAACACCAGCAACAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27136
Current Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
We currently estimate that this allele will be available during 2018.
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020116 Nonsense 576 1176 9 20
ENSDART00000111005 Nonsense 458 1058 10 21
ENSDART00000139603   None 104 None 2
Genomic Location (Zv9):
Chromosome 8 (position 11728822)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 10940302
GRCz11 8 10978007
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
None
Flanking Sequence:
AACACCAACACCAACAACAGCAGCAGCAACAACAACAACAACAACAACAA[C/T]AGCAGCAGCAACAACAACAACAGCAACACCAGCAACAAATTCAGCAGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15516
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020116 Nonsense 758 1176 12 20
ENSDART00000111005 Nonsense 640 1058 13 21
ENSDART00000139603   None 104 None 2
Genomic Location (Zv9):
Chromosome 8 (position 11734451)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 10934673
GRCz11 8 10972378
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
CAGCTTGAAGATGCYGGCTCTAGCACACTGGATAATATCCTAAGTCGGTA[T/A]ATTTCTGCTAATGCATATCCTACTGTCGGACCCACAAACCCATCRCCAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16614
Current Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020116 Nonsense 1090 1176 19 20
ENSDART00000111005 Nonsense 972 1058 20 21
ENSDART00000139603   None 104 None 2
Genomic Location (Zv9):
Chromosome 8 (position 11749397)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 10919727
GRCz11 8 10957432
KASP Assay ID:
None (used for ordering genotyping assays from LGC Genomics)
KASP Sequence:
TTTTTTTTTTCCTTTTGTTTCTGTGCTGTCGTTGCCCTTTTTAGATGTCT[C/T]GAATAATCCAGGTTTATGATGAGGAGAAACAGAGTAATGTCCAGGTAAGANANN
Associated Phenotype:
Not determined

OMIM

More OMIM information for TRIM33

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